TATA-Binding Protein
From Proteopedia
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{{STRUCTURE_1tbp| PDB=1tbp | SIZE=300| SCENE=TATA-Binding_Protein/Cv/1 |right|CAPTION=TATA-binding protein, [[1tbp]] }} | {{STRUCTURE_1tbp| PDB=1tbp | SIZE=300| SCENE=TATA-Binding_Protein/Cv/1 |right|CAPTION=TATA-binding protein, [[1tbp]] }} | ||
| - | [[TATA- | + | [[TATA-Binding protein]] (TBP) binds to TATA box in DNA and is part of the RNA polymerase II transcription complex. The transcription factor proteins are named TFIIA to TFIIH. TBP is part of TFIID. Its interaction with DNA initiates the DNA strands separation. The images at the left and at the right correspond to one representative TBP, ''i.e.'' the crystal structure of yeast TATA-binding protein ([[1tbp]]). |
{{TOC limit|limit=2}} | {{TOC limit|limit=2}} | ||
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| - | 2z8u – TBP – Methanococcus janaschii | + | [[2z8u]] – TBP – ''Methanococcus janaschii''<br /> |
| - | 1pcz – PwTBP - Pyrococcus woesei | + | [[1pcz]] – PwTBP - ''Pyrococcus woesei''<br /> |
| - | 1vok – AtTBP - Arabidopsis thaliana | + | [[1vok]] – AtTBP - ''Arabidopsis thaliana''<br /> |
| - | 1tbp – yTBP - yeast | + | [[1tbp]] – yTBP - yeast<br /> |
| - | 1mp9 – TBP – Sulfolobus acidocaldarius | + | [[1mp9]] – TBP – ''Sulfolobus acidocaldarius''<br /> |
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| - | 1ytb - yTBP + DNA TATA | + | [[1ytb]] - yTBP + DNA TATA<br /> |
| - | 1cdw - hTBP core domain+ DNA TATA - human | + | [[1cdw]] - hTBP core domain+ DNA TATA - human<br /> |
| - | 1tgh - hTBP + DNA TATA | + | [[1tgh]] - hTBP + DNA TATA<br /> |
| - | 1qn5, 1qn6, 1qn7, 1qn8, 1qn9, 1qna, 1qnb, 1qnc, 1qne, 1qn3, 1qn4 - AtTBP + DNA TATA | + | [[1qn5]], [[1qn6]], [[1qn7]], [[1qn8]], [[1qn9]], [[1qna]], [[1qnb]], [[1qnc]], [[1qne]], [[1qn3]], [[1qn4]] - AtTBP + DNA TATA <br /> |
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| - | 1rm1 – yTBP+TFIIA | + | [[1rm1]] – yTBP+TFIIA α, β, γ chains+ DNA TATA <br /> |
| - | 1ytf - yTBP+TFIIA + DNA TATA | + | [[1ytf]] - yTBP+TFIIA + DNA TATA<br /> |
| - | 1nh2 – yTBP C-terminal+TFIIA | + | [[1nh2]] – yTBP C-terminal+TFIIA α, β, γ chains+ DNA TATA<br /> |
| - | 1nvp - hTBP C-terminal+ TFIIA | + | [[1nvp]] - hTBP C-terminal+ TFIIA α, β, γ chains+ DNA TATA <br /> |
| - | 1jfi - hTBP C-terminal+ TFIIA | + | [[1jfi]] - hTBP C-terminal+ TFIIA NC2+ DNA TATA<br /> |
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| - | 1ngm - yTBP C-terminal+TFIIIB BRF1 subunit + DNA TATA | + | [[1ngm]] - yTBP C-terminal+TFIIIB BRF1 subunit + DNA TATA<br /> |
| - | 1tba – yTBP core domain+TAFII230 fragment - NMR | + | [[1tba]] – yTBP core domain+TAFII230 fragment - NMR<br /> |
| - | 1c9b - hTBP C-terminal+TFIIBC+adenovirus major late promoter | + | [[1c9b]] - hTBP C-terminal+TFIIBC+adenovirus major late promoter<br /> |
| - | 1vol – AtTBP+hTFIIB+DNA TATA | + | [[1vol]] – AtTBP+hTFIIB+DNA TATA<br /> |
| - | 1ais, 1du3 - PwTBP N-terminal+ TFIIB C-terminal + DNA TATA | + | [[1ais]], [[1du3]] - PwTBP N-terminal+ TFIIB C-terminal + DNA TATA <br /> |
| - | + | ||
| - | + | ||
| + | [[1tba]] – yTBP core domain+TAFII230 fragment - NMR<br /> | ||
| + | {{Clear}} | ||
== Additional information == | == Additional information == | ||
Revision as of 13:53, 20 September 2010
TATA-Binding protein (TBP) binds to TATA box in DNA and is part of the RNA polymerase II transcription complex. The transcription factor proteins are named TFIIA to TFIIH. TBP is part of TFIID. Its interaction with DNA initiates the DNA strands separation. The images at the left and at the right correspond to one representative TBP, i.e. the crystal structure of yeast TATA-binding protein (1tbp).
Contents |
3D Structures of TATA-binding protein
TBP
2z8u – TBP – Methanococcus janaschii
1pcz – PwTBP - Pyrococcus woesei
1vok – AtTBP - Arabidopsis thaliana
1tbp – yTBP - yeast
1mp9 – TBP – Sulfolobus acidocaldarius
TBP+DNA TATA
1ytb - yTBP + DNA TATA
1cdw - hTBP core domain+ DNA TATA - human
1tgh - hTBP + DNA TATA
1qn5, 1qn6, 1qn7, 1qn8, 1qn9, 1qna, 1qnb, 1qnc, 1qne, 1qn3, 1qn4 - AtTBP + DNA TATA
TBP+DNA TATA+TFIIA
1rm1 – yTBP+TFIIA α, β, γ chains+ DNA TATA
1ytf - yTBP+TFIIA + DNA TATA
1nh2 – yTBP C-terminal+TFIIA α, β, γ chains+ DNA TATA
1nvp - hTBP C-terminal+ TFIIA α, β, γ chains+ DNA TATA
1jfi - hTBP C-terminal+ TFIIA NC2+ DNA TATA
TBP+DNA TATA+TFIIB
1ngm - yTBP C-terminal+TFIIIB BRF1 subunit + DNA TATA
1tba – yTBP core domain+TAFII230 fragment - NMR
1c9b - hTBP C-terminal+TFIIBC+adenovirus major late promoter
1vol – AtTBP+hTFIIB+DNA TATA
1ais, 1du3 - PwTBP N-terminal+ TFIIB C-terminal + DNA TATA
1tba – yTBP core domain+TAFII230 fragment - NMR
Additional information
This page has some initial scenes, but could use expansion and creation of new scenes.
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called the to represent its thymine-adenine-thymine-adenine-adenine (TATAA) nucleotide motif
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Proteopedia Page Contributors and Editors (what is this?)
Ala Jelani, Michal Harel, Eran Hodis, Alexander Berchansky, David Canner
