We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.
Template:STRUCTURE 1y3g
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
{{Structure | {{Structure | ||
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1y3g]], [[Resolution|resolution]] 2.10Å (<scene name='initialview01'>default scene</scene>)}}} | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1y3g]], [[Resolution|resolution]] 2.10Å (<scene name='initialview01'>default scene</scene>)}}} | ||
| - | |SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Ca+E+317'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Ca+E+318'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Ca+E+319'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+Ca+E+320'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+Zn+E+321'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+Dms+E+801'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+Dms+E+802'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+3pl+E+803'>AC8</scene>, <scene name='pdbsite=AC9:Binding+Site+For+Residue+Amm+E+804'>AC9</scene> and <scene name='pdbsite=BC1:Binding+Site+For+Residue+LEU+E+805'>BC1</scene> | ||
|LIGAND= <scene name='pdbligand=3PL:3-PHENYLPROPANAL'>3PL</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> | |LIGAND= <scene name='pdbligand=3PL:3-PHENYLPROPANAL'>3PL</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> | ||
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Thermolysin Thermolysin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.24.27 3.4.24.27] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Thermolysin Thermolysin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.24.27 3.4.24.27] </span> | ||
| - | |NONSTDRES=<scene name='pdbligand=AMM:'>AMM</scene> | + | |NONSTDRES=<scene name='pdbligand=AMM:(2S)-2-{[(AMINOMETHYL)(DIHYDROXY)SILYL]METHYL}-4-METHYLPENTANAL'>AMM</scene> |
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1y3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y3g OCA], [http://www.ebi.ac.uk/pdbsum/1y3g PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1y3g RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1y3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y3g OCA], [http://www.ebi.ac.uk/pdbsum/1y3g PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1y3g RCSB]</span> | ||
|FUNCTION={{GO|id=GO:0016787 | text = hydrolase activity}}{{GO|id=GO:0004222 | text = metalloendopeptidase activity}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0008270 | text = zinc ion binding}}{{GO|id=GO:0005509 | text = calcium ion binding}}{{GO|id=GO:0008237 | text = metallopeptidase activity}}{{GO|id=GO:0008233 | text = peptidase activity}} | |FUNCTION={{GO|id=GO:0016787 | text = hydrolase activity}}{{GO|id=GO:0004222 | text = metalloendopeptidase activity}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0008270 | text = zinc ion binding}}{{GO|id=GO:0005509 | text = calcium ion binding}}{{GO|id=GO:0008237 | text = metallopeptidase activity}}{{GO|id=GO:0008233 | text = peptidase activity}} | ||
Current revision
| |||||||||
| 1y3g, resolution 2.10Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Ligands: | , , , | ||||||||
| Non-Standard Residues: | |||||||||
| Activity: | Thermolysin, with EC number 3.4.24.27 | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
