This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2drq
From Proteopedia
(Difference between revisions)
m (Protected "2drq" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
[[Image:2drq.png|left|200px]] | [[Image:2drq.png|left|200px]] | ||
| - | <!-- | ||
| - | The line below this paragraph, containing "STRUCTURE_2drq", creates the "Structure Box" on the page. | ||
| - | You may change the PDB parameter (which sets the PDB file loaded into the applet) | ||
| - | or the SCENE parameter (which sets the initial scene displayed when the page is loaded), | ||
| - | or leave the SCENE parameter empty for the default display. | ||
| - | --> | ||
{{STRUCTURE_2drq| PDB=2drq | SCENE= }} | {{STRUCTURE_2drq| PDB=2drq | SCENE= }} | ||
===Crystal structure of reducing-end-xylose releasing exo-oligoxylanase D263G mutant=== | ===Crystal structure of reducing-end-xylose releasing exo-oligoxylanase D263G mutant=== | ||
| - | |||
| - | <!-- | ||
| - | The line below this paragraph, {{ABSTRACT_PUBMED_19819900}}, adds the Publication Abstract to the page | ||
| - | (as it appears on PubMed at http://www.pubmed.gov), where 19819900 is the PubMed ID number. | ||
| - | --> | ||
{{ABSTRACT_PUBMED_19819900}} | {{ABSTRACT_PUBMED_19819900}} | ||
==About this Structure== | ==About this Structure== | ||
| - | [[2drq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | [[2drq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_halodurans Bacillus halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DRQ OCA]. |
==Reference== | ==Reference== | ||
| - | <ref group="xtra">PMID: | + | <ref group="xtra">PMID:019819900</ref><ref group="xtra">PMID:016301312</ref><ref group="xtra">PMID:015718242</ref><ref group="xtra">PMID:016511021</ref><ref group="xtra">PMID:015491996</ref><references group="xtra"/> |
| - | [[Category: | + | [[Category: Bacillus halodurans]] |
[[Category: Oligosaccharide reducing-end xylanase]] | [[Category: Oligosaccharide reducing-end xylanase]] | ||
[[Category: Fushinobu, S.]] | [[Category: Fushinobu, S.]] | ||
| Line 32: | Line 21: | ||
[[Category: Wakagi, T.]] | [[Category: Wakagi, T.]] | ||
[[Category: Glycoside hydrolase family 8]] | [[Category: Glycoside hydrolase family 8]] | ||
| + | [[Category: Hydrolase]] | ||
[[Category: National project on protein structural and functional analyse]] | [[Category: National project on protein structural and functional analyse]] | ||
[[Category: Nppsfa]] | [[Category: Nppsfa]] | ||
[[Category: Structural genomic]] | [[Category: Structural genomic]] | ||
Revision as of 12:38, 23 January 2013
Crystal structure of reducing-end-xylose releasing exo-oligoxylanase D263G mutant
Template:ABSTRACT PUBMED 19819900
About this Structure
2drq is a 1 chain structure with sequence from Bacillus halodurans. Full crystallographic information is available from OCA.
Reference
- Hidaka M, Fushinobu S, Honda Y, Wakagi T, Shoun H, Kitaoka M. Structural explanation for the acquisition of glycosynthase activity. J Biochem. 2010 Feb;147(2):237-44. Epub 2009 Oct 9. PMID:19819900 doi:10.1093/jb/mvp159
- Honda Y, Kitaoka M. The first glycosynthase derived from an inverting glycoside hydrolase. J Biol Chem. 2006 Jan 20;281(3):1426-31. Epub 2005 Nov 21. PMID:16301312 doi:10.1074/jbc.M511202200
- Fushinobu S, Hidaka M, Honda Y, Wakagi T, Shoun H, Kitaoka M. Structural basis for the specificity of the reducing end xylose-releasing exo-oligoxylanase from Bacillus halodurans C-125. J Biol Chem. 2005 Apr 29;280(17):17180-6. Epub 2005 Feb 17. PMID:15718242 doi:10.1074/jbc.M413693200
- Honda Y, Fushinobu S, Hidaka M, Wakagi T, Shoun H, Kitaoka M. Crystallization and preliminary X-ray analysis of reducing-end xylose-releasing exo-oligoxylanase from Bacillus halodurans C-125. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 Mar 1;61(Pt, 3):291-2. Epub 2005 Feb 12. PMID:16511021 doi:10.1107/S1744309105003635
- Honda Y, Kitaoka M. A family 8 glycoside hydrolase from Bacillus halodurans C-125 (BH2105) is a reducing end xylose-releasing exo-oligoxylanase. J Biol Chem. 2004 Dec 31;279(53):55097-103. Epub 2004 Oct 18. PMID:15491996 doi:10.1074/jbc.M409832200
