This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2ici

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2ici" size="350" color="white" frame="true" align="right" spinBox="true" caption="2ici, resolution 1.560&Aring;" /> '''Crystal Structure o...)
Line 4: Line 4:
==Overview==
==Overview==
-
Superantigens (SAgs) are potent microbial toxins that bind simultaneously, to T cell receptors (TCRs) and class II major histocompatibility complex, molecules, resulting in the activation and expansion of large T cell, subsets and the onset of numerous human diseases. Within the bacterial SAg, family, streptococcal pyrogenic exotoxin I (SpeI) has been classified as, belonging to the group V SAg subclass, which are characterized by a, unique, relatively conserved approximately 15 amino acid extension (amino, acid residues 154 to 170 in SpeI; herein referred to as the alpha3-beta8, loop), absent in SAg groups I through IV. Here, we report the crystal, structure of SpeI at 1.56 A resolution. Although the alpha3-beta8 loop in, SpeI is several residues shorter than that of another group V SAg, staphylococcal enterotoxin serotype I, the C-terminal portions of these, loops, which are located adjacent to the putative TCR binding site, are, structurally similar. Mutagenesis and subsequent functional analysis of, SpeI indicates that TCR beta-chains are likely engaged in a similar, general orientation as other characterized SAgs. We show, however, that, the alpha3-beta8 loop length, and the presence of key glycine residues, are necessary for optimal activation of T cells. Based on Vbeta-skewing, analysis of human T cells activated with SpeI and structural models, we, propose that the alpha3-beta8 loop is positioned to form productive, intermolecular contacts with the TCR beta-chain, likely in framework, region 3, and that these contacts are required for optimal TCR recognition, by SpeI, and likely all other group V SAgs.
+
Superantigens (SAgs) are potent microbial toxins that bind simultaneously to T cell receptors (TCRs) and class II major histocompatibility complex molecules, resulting in the activation and expansion of large T cell subsets and the onset of numerous human diseases. Within the bacterial SAg family, streptococcal pyrogenic exotoxin I (SpeI) has been classified as belonging to the group V SAg subclass, which are characterized by a unique, relatively conserved approximately 15 amino acid extension (amino acid residues 154 to 170 in SpeI; herein referred to as the alpha3-beta8 loop), absent in SAg groups I through IV. Here, we report the crystal structure of SpeI at 1.56 A resolution. Although the alpha3-beta8 loop in SpeI is several residues shorter than that of another group V SAg, staphylococcal enterotoxin serotype I, the C-terminal portions of these loops, which are located adjacent to the putative TCR binding site, are structurally similar. Mutagenesis and subsequent functional analysis of SpeI indicates that TCR beta-chains are likely engaged in a similar general orientation as other characterized SAgs. We show, however, that the alpha3-beta8 loop length, and the presence of key glycine residues, are necessary for optimal activation of T cells. Based on Vbeta-skewing analysis of human T cells activated with SpeI and structural models, we propose that the alpha3-beta8 loop is positioned to form productive intermolecular contacts with the TCR beta-chain, likely in framework region 3, and that these contacts are required for optimal TCR recognition by SpeI, and likely all other group V SAgs.
==About this Structure==
==About this Structure==
Line 10: Line 10:
==Reference==
==Reference==
-
Crystal Structure of the Streptococcal Superantigen SpeI and Functional Role of a Novel Loop Domain in T Cell Activation by Group V Superantigens., Brouillard JN, Gunther S, Varma AK, Gryski I, Herfst CA, Rahman AK, Leung DY, Schlievert PM, Madrenas J, Sundberg EJ, McCormick JK, J Mol Biol. 2007 Apr 6;367(4):925-34. Epub 2007 Jan 12. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=17303163 17303163]
+
Crystal structure of the streptococcal superantigen SpeI and functional role of a novel loop domain in T cell activation by group V superantigens., Brouillard JN, Gunther S, Varma AK, Gryski I, Herfst CA, Rahman AK, Leung DY, Schlievert PM, Madrenas J, Sundberg EJ, McCormick JK, J Mol Biol. 2007 Apr 6;367(4):925-34. Epub 2007 Jan 12. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=17303163 17303163]
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Streptococcus pyogenes]]
[[Category: Streptococcus pyogenes]]
[[Category: Gunther, S.]]
[[Category: Gunther, S.]]
-
[[Category: Sundberg, E.J.]]
+
[[Category: Sundberg, E J.]]
-
[[Category: Varma, A.K.]]
+
[[Category: Varma, A K.]]
[[Category: MG]]
[[Category: MG]]
[[Category: streptococcal superantigen spei]]
[[Category: streptococcal superantigen spei]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 20:38:49 2008''
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:51:12 2008''

Revision as of 15:51, 21 February 2008


2ici, resolution 1.560Å

Drag the structure with the mouse to rotate

Crystal Structure of Streptococcal Pyrogenic Exotoxin I

Overview

Superantigens (SAgs) are potent microbial toxins that bind simultaneously to T cell receptors (TCRs) and class II major histocompatibility complex molecules, resulting in the activation and expansion of large T cell subsets and the onset of numerous human diseases. Within the bacterial SAg family, streptococcal pyrogenic exotoxin I (SpeI) has been classified as belonging to the group V SAg subclass, which are characterized by a unique, relatively conserved approximately 15 amino acid extension (amino acid residues 154 to 170 in SpeI; herein referred to as the alpha3-beta8 loop), absent in SAg groups I through IV. Here, we report the crystal structure of SpeI at 1.56 A resolution. Although the alpha3-beta8 loop in SpeI is several residues shorter than that of another group V SAg, staphylococcal enterotoxin serotype I, the C-terminal portions of these loops, which are located adjacent to the putative TCR binding site, are structurally similar. Mutagenesis and subsequent functional analysis of SpeI indicates that TCR beta-chains are likely engaged in a similar general orientation as other characterized SAgs. We show, however, that the alpha3-beta8 loop length, and the presence of key glycine residues, are necessary for optimal activation of T cells. Based on Vbeta-skewing analysis of human T cells activated with SpeI and structural models, we propose that the alpha3-beta8 loop is positioned to form productive intermolecular contacts with the TCR beta-chain, likely in framework region 3, and that these contacts are required for optimal TCR recognition by SpeI, and likely all other group V SAgs.

About this Structure

2ICI is a Single protein structure of sequence from Streptococcus pyogenes with as ligand. Full crystallographic information is available from OCA.

Reference

Crystal structure of the streptococcal superantigen SpeI and functional role of a novel loop domain in T cell activation by group V superantigens., Brouillard JN, Gunther S, Varma AK, Gryski I, Herfst CA, Rahman AK, Leung DY, Schlievert PM, Madrenas J, Sundberg EJ, McCormick JK, J Mol Biol. 2007 Apr 6;367(4):925-34. Epub 2007 Jan 12. PMID:17303163

Page seeded by OCA on Thu Feb 21 17:51:12 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools