This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3g7m

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3g7m" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:3g7m.png|left|200px]]
+
==Structure of the thaumatin-like xylanase inhibitor TLXI==
-
 
+
<StructureSection load='3g7m' size='340' side='right' caption='[[3g7m]], [[Resolution|resolution]] 2.91&Aring;' scene=''>
-
<!--
+
== Structural highlights ==
-
The line below this paragraph, containing "STRUCTURE_3g7m", creates the "Structure Box" on the page.
+
<table><tr><td colspan='2'>[[3g7m]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G7M OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3G7M FirstGlance]. <br>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene><br>
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tlxi ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4565 Triticum aestivum])</td></tr>
-
or leave the SCENE parameter empty for the default display.
+
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3g7m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3g7m OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3g7m RCSB], [http://www.ebi.ac.uk/pdbsum/3g7m PDBsum]</span></td></tr>
-
-->
+
<table>
-
{{STRUCTURE_3g7m| PDB=3g7m | SCENE= }}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
===Structure of the thaumatin-like xylanase inhibitor TLXI===
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g7/3g7m_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[3g7m]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G7M OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==Reference==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
-
<ref group="xtra">PMID:020544973</ref><references group="xtra"/>
+
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Triticum aestivum]]
[[Category: Triticum aestivum]]
[[Category: Courtin, C M.]]
[[Category: Courtin, C M.]]

Revision as of 09:51, 21 May 2014

Structure of the thaumatin-like xylanase inhibitor TLXI

3g7m, resolution 2.91Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3g7m"
Views
Personal tools
Navigation
Toolbox