This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3ldr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3ldr" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:3ldr.png|left|200px]]
+
==Crystal structure of fructosyltransferase (D191A) from A. japonicus in complex with 1-Kestose==
-
 
+
<StructureSection load='3ldr' size='340' side='right' caption='[[3ldr]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
<!--
+
== Structural highlights ==
-
The line below this paragraph, containing "STRUCTURE_3ldr", creates the "Structure Box" on the page.
+
<table><tr><td colspan='2'>[[3ldr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aspergillus_japonicus Aspergillus japonicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LDR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LDR FirstGlance]. <br>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DQR:BETA-D-FRUCTOFURANOSYL-(2- 1)-BETA-D-FRUCTOFURANOSYL+ALPHA-D-GLUCOPYRANOSIDE'>DQR</scene><br>
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ldk|3ldk]], [[3lem|3lem]], [[3lf7|3lf7]], [[3lfi|3lfi]], [[3lig|3lig]], [[3lih|3lih]]</td></tr>
-
or leave the SCENE parameter empty for the default display.
+
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ldr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ldr OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ldr RCSB], [http://www.ebi.ac.uk/pdbsum/3ldr PDBsum]</span></td></tr>
-
-->
+
<table>
-
{{STRUCTURE_3ldr| PDB=3ldr | SCENE= }}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
===Crystal structure of fructosyltransferase (D191A) from A. japonicus in complex with 1-Kestose===
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ld/3ldr_consurf.spt"</scriptWhenChecked>
-
<!--
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
The line below this paragraph, {{ABSTRACT_PUBMED_020466731}}, adds the Publication Abstract to the page
+
<text>to colour the structure by Evolutionary Conservation</text>
-
(as it appears on PubMed at http://www.pubmed.gov), where 020466731 is the PubMed ID number.
+
</jmolCheckbox>
-
-->
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
-
{{ABSTRACT_PUBMED_020466731}}
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
[[3ldr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aspergillus_japonicus Aspergillus japonicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LDR OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:020466731</ref><references group="xtra"/>
+
[[Category: Aspergillus japonicus]]
[[Category: Aspergillus japonicus]]
[[Category: Chen, C J.]]
[[Category: Chen, C J.]]

Revision as of 09:38, 21 May 2014

Crystal structure of fructosyltransferase (D191A) from A. japonicus in complex with 1-Kestose

3ldr, resolution 2.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Views
Personal tools
Navigation
Toolbox