3gm7

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[[Image:3gm7.png|left|200px]]
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==1.58 A resolution X-ray structure of (CUG)6==
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<StructureSection load='3gm7' size='340' side='right' caption='[[3gm7]], [[Resolution|resolution]] 1.58&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3gm7]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GM7 FirstGlance]. <br>
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</td></tr><tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1zev|1zev]], [[3glp|3glp]]</td></tr>
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<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gm7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gm7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gm7 RCSB], [http://www.ebi.ac.uk/pdbsum/3gm7 PDBsum]</span></td></tr>
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<table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Myotonic dystrophy (DM) type 1 is associated with an expansion of (&gt;50) CTG repeats within the 3' untranslated region (UTR) of the dystrophin myotonin protein kinase gene (dmpk). In the corresponding mRNA transcript, the CUG repeats form an extended stem-loop structure. The double-stranded RNA of the stem sequesters RNA binding proteins away from their normal cellular targets resulting in aberrant transcription, alternative splicing patterns, or both, thereby leading to DM. To better understand the structural basis of DM type 1, we determined to 1.58-A resolution the x-ray crystal structure of an 18-bp RNA containing six CUG repeats. The CUG repeats form antiparallel double-stranded helices that stack end-on-end in the crystal to form infinite, pseudocontinuous helices similar to the long CUG stem loops formed by the expanded CUG repeats in DM type 1. The CUG helix is very similar in structure to A-form RNA with the exception of the unique U-U mismatches. This structure provides a high-resolution view of a toxic, trinucleotide repeat RNA.
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The structural basis of myotonic dystrophy from the crystal structure of CUG repeats.,Mooers BH, Logue JS, Berglund JA Proc Natl Acad Sci U S A. 2005 Nov 15;102(46):16626-31. Epub 2005 Nov 3. PMID:16269545<ref>PMID:16269545</ref>
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The line below this paragraph, containing "STRUCTURE_3gm7", creates the "Structure Box" on the page.
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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or leave the SCENE parameter empty for the default display.
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{{STRUCTURE_3gm7| PDB=3gm7 | SCENE= }}
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===1.58 A resolution X-ray structure of (CUG)6===
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
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</div>
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== References ==
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<references/>
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The line below this paragraph, {{ABSTRACT_PUBMED_16269545}}, adds the Publication Abstract to the page
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__TOC__
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(as it appears on PubMed at http://www.pubmed.gov), where 16269545 is the PubMed ID number.
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</StructureSection>
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{{ABSTRACT_PUBMED_16269545}}
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==About this Structure==
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[[3gm7]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM7 OCA].
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==Reference==
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<ref group="xtra">PMID:016269545</ref><ref group="xtra">PMID:019433512</ref><references group="xtra"/>
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[[Category: Kierzek, R.]]
[[Category: Kierzek, R.]]
[[Category: Kiliszek, A.]]
[[Category: Kiliszek, A.]]

Revision as of 09:42, 21 May 2014

1.58 A resolution X-ray structure of (CUG)6

3gm7, resolution 1.58Å

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