2y4z

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[[Image:2y4z.jpg|left|200px]]
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==STRUCTURE OF THE AMINO-TERMINAL CAPSID RESTRICTION ESCAPE MUTATION N-MLV L10W==
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<StructureSection load='2y4z' size='340' side='right' caption='[[2y4z]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[2y4z]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Murine_leukemia_virus Murine leukemia virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Y4Z OCA]. <br>
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</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene><br>
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<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1u7k|1u7k]]</td></tr>
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<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucokinase Glucokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span></td></tr>
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<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2y4z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2y4z OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2y4z RCSB], [http://www.ebi.ac.uk/pdbsum/2y4z PDBsum]</span></td></tr>
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<table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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After entry into target cells, retroviruses encounter the host restriction factors such as Fv1 and TRIM5alpha. While it is clear that these factors target retrovirus capsid proteins (CA), recognition remains poorly defined in the absence of structural information. To better understand the binding interaction between TRIM5alpha and CA, we selected a panel of novel N-tropic murine leukaemia virus (N-MLV) escape mutants by a serial passage of replication competent N-MLV in rhesus macaque TRIM5alpha (rhTRIM5alpha)-positive cells using a small percentage of unrestricted cells to allow multiple rounds of virus replication. The newly identified mutations, many of which involve changes in charge, are distributed over the outer 'top' surface of N-MLV CA, including the N-terminal beta-hairpin, and map up to 29 A(o) apart. Biological characterisation with a number of restriction factors revealed that only one of the new mutations affects restriction by human TRIM5alpha, indicating significant differences in the binding interaction between N-MLV and the two TRIM5alphas, whereas three of the mutations result in dual sensitivity to Fv1(n) and Fv1(b). Structural studies of two mutants show that no major changes in the overall CA conformation are associated with escape from restriction. We conclude that interactions involving much, if not all, of the surface of CA are vital for TRIM5alpha binding.
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Novel escape mutants suggest an extensive TRIM5alpha binding site spanning the entire outer surface of the murine leukemia virus capsid protein.,Ohkura S, Goldstone DC, Yap MW, Holden-Dye K, Taylor IA, Stoye JP PLoS Pathog. 2011 Mar;7(3):e1002011. Epub 2011 Mar 31. PMID:21483490<ref>PMID:21483490</ref>
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The line below this paragraph, containing "STRUCTURE_2y4z", creates the "Structure Box" on the page.
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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{{STRUCTURE_2y4z| PDB=2y4z | SCENE= }}
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===STRUCTURE OF THE AMINO-TERMINAL CAPSID RESTRICTION ESCAPE MUTATION N-MLV L10W===
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
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</div>
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== References ==
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<references/>
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The line below this paragraph, {{ABSTRACT_PUBMED_21483490}}, adds the Publication Abstract to the page
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__TOC__
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(as it appears on PubMed at http://www.pubmed.gov), where 21483490 is the PubMed ID number.
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</StructureSection>
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{{ABSTRACT_PUBMED_21483490}}
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==About this Structure==
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[[2y4z]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Murine_leukemia_virus Murine leukemia virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Y4Z OCA].
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==Reference==
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<ref group="xtra">PMID:021483490</ref><references group="xtra"/>
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[[Category: Murine leukemia virus]]
[[Category: Murine leukemia virus]]
[[Category: Goldstone, D C.]]
[[Category: Goldstone, D C.]]

Revision as of 07:52, 14 May 2014

STRUCTURE OF THE AMINO-TERMINAL CAPSID RESTRICTION ESCAPE MUTATION N-MLV L10W

2y4z, resolution 2.00Å

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