2y1v

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[[Image:2y1v.png|left|200px]]
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==Full length structure of RrgB Pilus protein from Streptococcus pneumoniae==
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<StructureSection load='2y1v' size='340' side='right' caption='[[2y1v]], [[Resolution|resolution]] 2.39&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[2y1v]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Y1V OCA]. <br>
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</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene><br>
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<tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2x9z|2x9z]], [[2x9w|2x9w]], [[2x9y|2x9y]], [[2x9x|2x9x]]</td></tr>
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<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucokinase Glucokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span></td></tr>
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<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2y1v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2y1v OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2y1v RCSB], [http://www.ebi.ac.uk/pdbsum/2y1v PDBsum]</span></td></tr>
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<table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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RrgB is the major pilin which forms the pneumococcal pilus backbone. We report the high-resolution crystal structure of the full-length form of RrgB containing the IPQTG sorting motif. RrgB fold is organized into four distinct domains, D1 to D4, each of them stabilized by an isopeptide bond. Crystal packing revealed a head-to-tail organization involving the interaction of the IPQTG motif into the D1 domain of two successive RrgB monomers. This fibrillar assembly, which fits into the electron microscopy density map of the native pilus, likely induces the formation of the D1 isopeptide bond, as observed for the first time here, since neither in published structures, nor in soluble RrgB produced in Escherichia coli or in Streptococcus pneumoniae, the D1 bond is present. Experiments performed in live bacteria confirmed that the intermolecular bond linking the RrgB subunits takes place between the IPQTG motif of one RrgB subunit and the Lys183 pilin motif residue of an adjacent RrgB subunit. In addition, we present data indicating that the D1 isopeptide bond is involved in RrgB stabilization. In conclusion, the crystal RrgB-fiber is a compelling model for deciphering the molecular details required to generate the pneumococcal pilus.
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The full-length Streptococcus pneumoniae major pilin RrgB crystallizes in a fiber-like structure, which presents the D1 isopeptide bond and provides details on the mechanism of pilus polymerization.,El Mortaji L, Contreras-Martel C, Moschioni M, Ferlenghi I, Manzano C, Vernet T, Dessen A, DI Guilmi AM Biochem J. 2011 Oct 21. PMID:22013894<ref>PMID:22013894</ref>
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The line below this paragraph, containing "STRUCTURE_2y1v", creates the "Structure Box" on the page.
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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or leave the SCENE parameter empty for the default display.
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{{STRUCTURE_2y1v| PDB=2y1v | SCENE= }}
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===Full length structure of RrgB Pilus protein from Streptococcus pneumoniae===
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
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</div>
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== References ==
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<references/>
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The line below this paragraph, {{ABSTRACT_PUBMED_22013894}}, adds the Publication Abstract to the page
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__TOC__
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(as it appears on PubMed at http://www.pubmed.gov), where 22013894 is the PubMed ID number.
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</StructureSection>
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{{ABSTRACT_PUBMED_22013894}}
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==About this Structure==
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[[2y1v]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Y1V OCA].
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==Reference==
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<ref group="xtra">PMID:022013894</ref><references group="xtra"/>
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[[Category: Streptococcus pneumoniae]]
[[Category: Streptococcus pneumoniae]]
[[Category: Contreras-Martel, C.]]
[[Category: Contreras-Martel, C.]]

Revision as of 07:43, 14 May 2014

Full length structure of RrgB Pilus protein from Streptococcus pneumoniae

2y1v, resolution 2.39Å

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