Sm-like protein

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{{STRUCTURE_2y9a| PDB=2y9a | SIZE=400| SCENE= |right|CAPTION=Human U4 snRNP core domain [[2y9a]] }}
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{{STRUCTURE_1m8v| PDB=1m8v | SIZE=400| SCENE= |right|CAPTION=Sm1 complex with RNA [[1m8v]] }}
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'''Sm-like proteins''' are ring-shaped oligomers of 6-7 members which show nucleic acid-binding activity. The '''Sm proteins''' together with snRNA molecules form the core of the snRNP. For details on Sm1 of ''Archaeoglobus fulgidus'' see [[AF-Sm1]].
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'''Sm-like proteins''' are ring-shaped oligomers of 6-7 members which show nucleic acid-binding activity. For details on Sm1 of ''Archaeoglobus fulgidus'' see [[AF-Sm1]].
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== 3D Structures of Sm protein ==
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== 3D Structures of Sm-like protein ==
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[[1n9r]], [[1n9s]] – ySmF – yeast<br />
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[[3pgw]] – hSmB + hSmD1 + hSmD3 + hSmE + hSmF + hSmG + hU1 snRNP + DNA – human<br />
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[[2y9a]], [[2y9b]], [[2y9c]], [[2y9d]] - hSmB + hSmD1 + hSmD2 + hSmD3 + hSmE + hSmF + hSmG + hU4A snRNP <br />
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[[3s6n]] - hSmD1 + hSmD2 + hSmD3 + hSmE + hSmF + hSmG + SMN-interacting protein + SMN protein
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===Sm-like protein===
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[[1i81]], [[1jri]], [[1mgq]], [[1jbm]] – MtSm – ''Methanothermobacter thermautotrophicus''<br />
[[1i81]], [[1jri]], [[1mgq]], [[1jbm]] – MtSm – ''Methanothermobacter thermautotrophicus''<br />

Revision as of 11:55, 22 February 2012

Template:STRUCTURE 1m8v


Sm-like proteins are ring-shaped oligomers of 6-7 members which show nucleic acid-binding activity. For details on Sm1 of Archaeoglobus fulgidus see AF-Sm1.

Contents

3D Structures of Sm-like protein

1i81, 1jri, 1mgq, 1jbm – MtSm – Methanothermobacter thermautotrophicus
1loj – MtSm + UMP
1i8f, 1m5q, 1lnx – Sm – Pyrobaculum aerophilum
1i4k – AfSm1 – Archaeoglobus fulgidus
1i5l – AfSm1 + RNA
1ljo – AfSm2
1m8v – PaSm1 + RNA – Pyrococcus abyssii
1h64 – PaSm
2fb7 – Sm – zebra fish – NMR
3bw1 – ySmX4

3pgg – LSm5 – Cryptosporidium parvum
3swn – LSm5 + LSm6 + LSm7 – fission yeast

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel

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