3mei
From Proteopedia
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- | [[ | + | ==Regulatory motif from the thymidylate synthase mRNA== |
+ | <StructureSection load='3mei' size='340' side='right' caption='[[3mei]], [[Resolution|resolution]] 1.97Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[3mei]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MEI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MEI FirstGlance]. <br> | ||
+ | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br> | ||
+ | <tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=5BU:5-BROMO-URIDINE-5-MONOPHOSPHATE'>5BU</scene></td></tr> | ||
+ | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mei FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mei OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3mei RCSB], [http://www.ebi.ac.uk/pdbsum/3mei PDBsum]</span></td></tr> | ||
+ | <table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | A sequence around the start codon of the mRNA of human thymidylate synthase (TS) folds into a secondary-structure motif in which the initiation site is sequestered in a metastable hairpin. Binding of the protein to its own mRNA at the hairpin prevents the production of TS through a translation-repression feedback mechanism. Stabilization of the mRNA hairpin by other ligands has been proposed as a strategy to reduce TS levels in anticancer therapy. Rapidly proliferating cells require high TS activity to maintain the production of thymidine as a building block for DNA synthesis. The crystal structure of a model oligonucleotide (TS1) that represents the TS-binding site of the mRNA has been determined. While fluorescence studies showed that the TS1 RNA preferentially adopts a hairpin structure in solution, even at high RNA concentrations, an asymmetric dimer of two hybridized TS1 strands was obtained in the crystal. The TS1 dimer contains an unusual S-turn motif that also occurs in the `off' state of the human ribosomal decoding site RNA. | ||
- | + | Structure of an RNA dimer of a regulatory element from human thymidylate synthase mRNA.,Dibrov S, McLean J, Hermann T Acta Crystallogr D Biol Crystallogr. 2011 Feb;67(Pt 2):97-104. Epub 2011, Jan 8. PMID:21245530<ref>PMID:21245530</ref> | |
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- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | + | == References == | |
- | + | <references/> | |
- | + | __TOC__ | |
- | + | </StructureSection> | |
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[[Category: Dibrov, S.]] | [[Category: Dibrov, S.]] | ||
[[Category: Hermann, T.]] | [[Category: Hermann, T.]] |
Revision as of 10:34, 28 May 2014
Regulatory motif from the thymidylate synthase mRNA
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Categories: Dibrov, S. | Hermann, T. | McLean, J. | C-c base pair | Rna | S-turn