2nyi

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2nyi" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:2nyi.png|left|200px]]
+
==Crystal Structure of an Unknown Protein from Galdieria sulphuraria==
 +
<StructureSection load='2nyi' size='340' side='right' caption='[[2nyi]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2nyi]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Galdieria_sulphuraria Galdieria sulphuraria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NYI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2NYI FirstGlance]. <br>
 +
</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
 +
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">c855_101305g34.t1(MSU_Galdi) ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=130081 Galdieria sulphuraria])</td></tr>
 +
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2nyi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nyi OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2nyi RCSB], [http://www.ebi.ac.uk/pdbsum/2nyi PDBsum], [http://www.topsan.org/Proteins/CESG/2nyi TOPSAN]</span></td></tr>
 +
<table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ny/2nyi_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The ACT domain is a structurally conserved small molecule binding domain which is mostly involved in amino acid and purine metabolism. Here, we report the crystal structure of a tandem ACT domain-containing protein (ACTP) from Galdieria sulphuraria. The two ACTP monomers in the asymmetric unit form a dimer with a non-crystallographic twofold axis in a domain-swapped manner, showing a horseshoe-like structure with a central crevice. This structure contributes to expand our knowledge on the structural diversity of ACT domain-containing proteins. Proteins 2012; (c) 2012 Wiley Periodicals, Inc.
-
{{STRUCTURE_2nyi| PDB=2nyi | SCENE= }}
+
Crystal structure of tandem ACT domain-containing protein ACTP from Galdieria sulphuraria.,Bitto E, Kim do J, Bingman CA, Kim HJ, Han BW, Phillips GN Jr Proteins. 2012 Aug;80(8):2105-9. doi: 10.1002/prot.24101. Epub 2012 Jun 7. PMID:22528523<ref>PMID:22528523</ref>
-
===Crystal Structure of an Unknown Protein from Galdieria sulphuraria===
+
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-
 
+
</div>
-
{{ABSTRACT_PUBMED_22528523}}
+
== References ==
-
 
+
<references/>
-
==About this Structure==
+
__TOC__
-
[[2nyi]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Galdieria_sulphuraria Galdieria sulphuraria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NYI OCA].
+
</StructureSection>
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:022528523</ref><references group="xtra"/>
+
[[Category: Galdieria sulphuraria]]
[[Category: Galdieria sulphuraria]]
[[Category: Bingman, C A.]]
[[Category: Bingman, C A.]]

Revision as of 10:39, 28 May 2014

Crystal Structure of an Unknown Protein from Galdieria sulphuraria

2nyi, resolution 1.80Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Views
Personal tools
Navigation
Toolbox