We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

1bwv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:1bwv.jpg|left|200px]]<br /><applet load="1bwv" size="350" color="white" frame="true" align="right" spinBox="true"
+
[[Image:1bwv.jpg|left|200px]]
-
caption="1bwv, resolution 2.4&Aring;" />
+
 
-
'''ACTIVATED RIBULOSE 1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE (RUBISCO) COMPLEXED WITH THE REACTION INTERMEDIATE ANALOGUE 2-CARBOXYARABINITOL 1,5-BISPHOSPHATE'''<br />
+
{{Structure
 +
|PDB= 1bwv |SIZE=350|CAPTION= <scene name='initialview01'>1bwv</scene>, resolution 2.4&Aring;
 +
|SITE= <scene name='pdbsite=MGA:Mg+Binding+Site+Chain+A'>MGA</scene>, <scene name='pdbsite=MGC:Mg+Binding+Site+Chain+C'>MGC</scene>, <scene name='pdbsite=MGE:Mg+Binding+Site+Chain+E'>MGE</scene> and <scene name='pdbsite=MGG:Mg+Binding+Site+Chain+G'>MGG</scene>
 +
|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> and <scene name='pdbligand=CAP:2-CARBOXYARABINITOL-1,5-DIPHOSPHATE'>CAP</scene>
 +
|ACTIVITY= [http://en.wikipedia.org/wiki/Ribulose-bisphosphate_carboxylase Ribulose-bisphosphate carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.39 4.1.1.39]
 +
|GENE=
 +
}}
 +
 
 +
'''ACTIVATED RIBULOSE 1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE (RUBISCO) COMPLEXED WITH THE REACTION INTERMEDIATE ANALOGUE 2-CARBOXYARABINITOL 1,5-BISPHOSPHATE'''
 +
 
==Overview==
==Overview==
Line 7: Line 16:
==About this Structure==
==About this Structure==
-
1BWV is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Galdieria_partita Galdieria partita] with <scene name='pdbligand=MG:'>MG</scene> and <scene name='pdbligand=CAP:'>CAP</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Ribulose-bisphosphate_carboxylase Ribulose-bisphosphate carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.39 4.1.1.39] Known structural/functional Sites: <scene name='pdbsite=MGA:Mg+Binding+Site+Chain+A'>MGA</scene>, <scene name='pdbsite=MGC:Mg+Binding+Site+Chain+C'>MGC</scene>, <scene name='pdbsite=MGE:Mg+Binding+Site+Chain+E'>MGE</scene> and <scene name='pdbsite=MGG:Mg+Binding+Site+Chain+G'>MGG</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BWV OCA].
+
1BWV is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Galdieria_partita Galdieria partita]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BWV OCA].
==Reference==
==Reference==
-
Orderly disposition of heterogeneous small subunits in D-ribulose-1,5-bisphosphate carboxylase/oxygenase from spinach., Shibata N, Inoue T, Fukuhara K, Nagara Y, Kitagawa R, Harada S, Kasai N, Uemura K, Kato K, Yokota A, Kai Y, J Biol Chem. 1996 Oct 25;271(43):26449-52. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=8900108 8900108]
+
Orderly disposition of heterogeneous small subunits in D-ribulose-1,5-bisphosphate carboxylase/oxygenase from spinach., Shibata N, Inoue T, Fukuhara K, Nagara Y, Kitagawa R, Harada S, Kasai N, Uemura K, Kato K, Yokota A, Kai Y, J Biol Chem. 1996 Oct 25;271(43):26449-52. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8900108 8900108]
[[Category: Galdieria partita]]
[[Category: Galdieria partita]]
[[Category: Protein complex]]
[[Category: Protein complex]]
Line 28: Line 37:
[[Category: lyase]]
[[Category: lyase]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 11:59:56 2008''
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 10:16:52 2008''

Revision as of 08:16, 20 March 2008

Image:1bwv.jpg


PDB ID 1bwv

Drag the structure with the mouse to rotate
, resolution 2.4Å
Sites: , , and
Ligands: and
Activity: Ribulose-bisphosphate carboxylase, with EC number 4.1.1.39
Coordinates: save as pdb, mmCIF, xml



ACTIVATED RIBULOSE 1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE (RUBISCO) COMPLEXED WITH THE REACTION INTERMEDIATE ANALOGUE 2-CARBOXYARABINITOL 1,5-BISPHOSPHATE


Overview

We determined the crystal structure of spinach ribulose-1, 5-bisphosphate carboxylase/oxygenase (Rubisco) by x-ray diffraction at 1.8-A resolution and found that the enzyme contained two kinds of S, SI and SII, present in equal number and disposed in an orderly way within the Rubisco holoenzyme. The electron density maps suggested that leucine was at residue 56 in SI, although histidine was at that position in SII. There were other residue differences. Thus, spinach Rubisco has a L8SI4SII4 subunit structure. The orderly disposition of the heterogeneous small subunits in the Rubisco holoenzyme provides accounts of a multigene family of S in plants.

About this Structure

1BWV is a Protein complex structure of sequences from Galdieria partita. Full crystallographic information is available from OCA.

Reference

Orderly disposition of heterogeneous small subunits in D-ribulose-1,5-bisphosphate carboxylase/oxygenase from spinach., Shibata N, Inoue T, Fukuhara K, Nagara Y, Kitagawa R, Harada S, Kasai N, Uemura K, Kato K, Yokota A, Kai Y, J Biol Chem. 1996 Oct 25;271(43):26449-52. PMID:8900108

Page seeded by OCA on Thu Mar 20 10:16:52 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1bwv"
Personal tools