This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Template:STRUCTURE 1hsg
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
|LIGAND= <scene name='pdbligand=MK1:N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY+BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE'>MK1</scene> | |LIGAND= <scene name='pdbligand=MK1:N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY+BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE'>MK1</scene> | ||
|GENE= HIV-1 PROTEASE FROM THE NY5 ISOLATE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11676 Human immunodeficiency virus 1]) | |GENE= HIV-1 PROTEASE FROM THE NY5 ISOLATE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11676 Human immunodeficiency virus 1]) | ||
| - | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1hsg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hsg OCA], [http://www. | + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1hsg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hsg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1hsg RCSB], [http://www.ebi.ac.uk/pdbsum/1hsg PDBsum]</span> |
|FUNCTION={{GO|id=GO:0016787 | text = hydrolase activity}}{{GO|id=GO:0016779 | text = nucleotidyltransferase activity}}{{GO|id=GO:0004523 | text = ribonuclease H activity}}{{GO|id=GO:0003676 | text = nucleic acid binding}}{{GO|id=GO:0004190 | text = aspartic-type endopeptidase activity}}{{GO|id=GO:0008233 | text = peptidase activity}}{{GO|id=GO:0004519 | text = endonuclease activity}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0016740 | text = transferase activity}}{{GO|id=GO:0003964 | text = RNA-directed DNA polymerase activity}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0005198 | text = structural molecule activity}}{{GO|id=GO:0003723 | text = RNA binding}}{{GO|id=GO:0000287 | text = magnesium ion binding}}{{GO|id=GO:0003887 | text = DNA-directed DNA polymerase activity}}{{GO|id=GO:0008270 | text = zinc ion binding}}{{GO|id=GO:0004518 | text = nuclease activity}}{{GO|id=GO:0003824 | text = catalytic activity}}{{GO|id=GO:0008907 | text = integrase activity}} | |FUNCTION={{GO|id=GO:0016787 | text = hydrolase activity}}{{GO|id=GO:0016779 | text = nucleotidyltransferase activity}}{{GO|id=GO:0004523 | text = ribonuclease H activity}}{{GO|id=GO:0003676 | text = nucleic acid binding}}{{GO|id=GO:0004190 | text = aspartic-type endopeptidase activity}}{{GO|id=GO:0008233 | text = peptidase activity}}{{GO|id=GO:0004519 | text = endonuclease activity}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0016740 | text = transferase activity}}{{GO|id=GO:0003964 | text = RNA-directed DNA polymerase activity}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0005198 | text = structural molecule activity}}{{GO|id=GO:0003723 | text = RNA binding}}{{GO|id=GO:0000287 | text = magnesium ion binding}}{{GO|id=GO:0003887 | text = DNA-directed DNA polymerase activity}}{{GO|id=GO:0008270 | text = zinc ion binding}}{{GO|id=GO:0004518 | text = nuclease activity}}{{GO|id=GO:0003824 | text = catalytic activity}}{{GO|id=GO:0008907 | text = integrase activity}} | ||
|PROCESS={{GO|id=GO:0016032 | text = viral reproduction}}{{GO|id=GO:0046797 | text = viral procapsid maturation}}{{GO|id=GO:0015074 | text = DNA integration}}{{GO|id=GO:0006508 | text = proteolysis}}{{GO|id=GO:0006310 | text = DNA recombination}}{{GO|id=GO:0006278 | text = RNA-dependent DNA replication}}{{GO|id=GO:0006313 | text = transposition, DNA-mediated}} | |PROCESS={{GO|id=GO:0016032 | text = viral reproduction}}{{GO|id=GO:0046797 | text = viral procapsid maturation}}{{GO|id=GO:0015074 | text = DNA integration}}{{GO|id=GO:0006508 | text = proteolysis}}{{GO|id=GO:0006310 | text = DNA recombination}}{{GO|id=GO:0006278 | text = RNA-dependent DNA replication}}{{GO|id=GO:0006313 | text = transposition, DNA-mediated}} | ||
Current revision
