3rqr
From Proteopedia
(Difference between revisions)
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| - | [[ | + | ==Crystal structure of the RYR domain of the rabbit ryanodine receptor== |
| + | <StructureSection load='3rqr' size='340' side='right' caption='[[3rqr]], [[Resolution|resolution]] 2.16Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[3rqr]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RQR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3RQR FirstGlance]. <br> | ||
| + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RYR1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9986 Oryctolagus cuniculus])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3rqr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rqr OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3rqr RCSB], [http://www.ebi.ac.uk/pdbsum/3rqr PDBsum]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | The ryanodine receptor (RyR) is a large, homotetrameric sarcoplasmic reticulum (SR) membrane protein essential for Ca(2+) cycling in both skeletal and cardiac muscle. Genetic mutations in RyR1 are associated with severe conditions including malignant hyperthermia (MH) and central core disease (CCD). One phosphorylation site (Ser 2843) has been identified in a segment of RyR1 flanked by two RyR motifs, which are found exclusively in all RyR isoforms organized as closely-associated tandem (or paired) motifs, and named after the protein itself. These motifs also contain six known MH mutations. In this study we designed, expressed, and purified the tandem RyR motifs and show that this domain contains a putative binding site for the Ca(2+) /calmodulin-dependent protein kinase beta isoform. We present a 2.2A resolution crystal structure of the RyR domain revealing a two-fold, symmetric, extended four-helix bundle stabilized by a beta-sheet. Using mathematical modelling we fit our crystal structure within a tetrameric EM structure of native RyR1 and propose that this domain is localized in the RyR's clamp region, which is absent in its cousin protein inositol 1,4,5-trisphosphate receptor. (c) 2012 The Authors Journal compilation (c) 2012 FEBS. | ||
| - | + | Structural Determination of the Phosphorylation Domain of the Ryanodine Receptor.,Sharma P, Ishiyama N, Nair U, Li W, Dong A, Miyake T, Wilson A, Ryan T, Maclennan DH, Kislinger T, Ikura M, Dhe-Paganon S, Gramolini AO FEBS J. 2012 Aug 22. doi: 10.1111/j.1742-4658.2012.08755.x. PMID:22913516<ref>PMID:22913516</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | + | </div> | |
| - | + | == References == | |
| - | + | <references/> | |
| - | == | + | __TOC__ |
| - | + | </StructureSection> | |
[[Category: Oryctolagus cuniculus]] | [[Category: Oryctolagus cuniculus]] | ||
| - | [[Category: Arrowsmith, C H | + | [[Category: Arrowsmith, C H]] |
| - | [[Category: Bountra, C | + | [[Category: Bountra, C]] |
| - | [[Category: Dhe-Paganon, S | + | [[Category: Dhe-Paganon, S]] |
| - | [[Category: Dong, A | + | [[Category: Dong, A]] |
| - | [[Category: Edwards, A M | + | [[Category: Edwards, A M]] |
| - | [[Category: Gramolini, A | + | [[Category: Gramolini, A]] |
| - | [[Category: Li, W | + | [[Category: Li, W]] |
| - | [[Category: Nair, U B | + | [[Category: Nair, U B]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | [[Category: Walker, J R | + | [[Category: Walker, J R]] |
| - | [[Category: Weigelt, J | + | [[Category: Weigelt, J]] |
[[Category: Metal transport]] | [[Category: Metal transport]] | ||
[[Category: Ryanodine receptor]] | [[Category: Ryanodine receptor]] | ||
[[Category: Ryr domain]] | [[Category: Ryr domain]] | ||
Revision as of 12:34, 9 December 2014
Crystal structure of the RYR domain of the rabbit ryanodine receptor
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