EibD
From Proteopedia
(Difference between revisions)
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Resolution limit: 1.99 Å <br> | Resolution limit: 1.99 Å <br> | ||
R/R free: 0.1585/0.1855 <br> | R/R free: 0.1585/0.1855 <br> | ||
| - | <br> | + | Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XQH OCA].<br> |
| + | |||
<scene name='EibD/2xqh/1'>Asymmetric unit</scene> contains a single polypeptide chain. The <scene name='EibD/2xqh_ba/3'>biological assembly</scene> consists of three copies of the monomer related by a three fold axis. | <scene name='EibD/2xqh/1'>Asymmetric unit</scene> contains a single polypeptide chain. The <scene name='EibD/2xqh_ba/3'>biological assembly</scene> consists of three copies of the monomer related by a three fold axis. | ||
| + | There are five distinct domains: | ||
| + | - YadA-like β-roll domain (ref); | ||
| + | - neck domain; | ||
| + | - right handed coiled-coil domain; | ||
| + | - mini β-sheet domain; | ||
| + | - left handed coiled-coil domain; | ||
| + | |||
| - | [[2xqh]] is a single chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XQH OCA]. | ||
== General information == | == General information == | ||
Antibodies: [http://dx.doi.org/10.2210/rcsb_pdb/mom_2001_9 RCSB PDB Molecule of the Month by David Goodsell] <ref>September 2001 Molecule of the Month by David Goodsell http://dx.doi.org/10.2210/rcsb_pdb/mom_2001_9</ref> | Antibodies: [http://dx.doi.org/10.2210/rcsb_pdb/mom_2001_9 RCSB PDB Molecule of the Month by David Goodsell] <ref>September 2001 Molecule of the Month by David Goodsell http://dx.doi.org/10.2210/rcsb_pdb/mom_2001_9</ref> | ||
Revision as of 12:08, 6 September 2012
Crystal structure of an immunoglobulin-binding fragment of the trimeric autotransporter adhesin (TAA) EibD
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Primery reference
- Leo JC, Lyskowski A, Hattula K, Hartmann MD, Schwarz H, Butcher SJ, Linke D, Lupas AN, Goldman A. The Structure of E. coli IgG-Binding Protein D Suggests a General Model for Bending and Binding in Trimeric Autotransporter Adhesins. Structure. 2011 Jul 13;19(7):1021-30. PMID:21742268 doi:10.1016/j.str.2011.03.021
- ↑ September 2001 Molecule of the Month by David Goodsell http://dx.doi.org/10.2210/rcsb_pdb/mom_2001_9
