3c91

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:3c91.png|left|200px]]
+
==Thermoplasma acidophilum 20S proteasome with an open gate==
 +
<StructureSection load='3c91' size='340' side='right' caption='[[3c91]], [[Resolution|resolution]] 6.80&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3c91]] is a 28 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C91 OCA]. <br>
 +
</td></tr><tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3c92|3c92]]</td></tr>
 +
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucokinase Glucokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span></td></tr>
 +
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3c91 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c91 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3c91 RCSB], [http://www.ebi.ac.uk/pdbsum/3c91 PDBsum]</span></td></tr>
 +
<table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c9/3c91_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Substrates enter the cylindrical 20S proteasome through a gated channel that is regulated by the ATPases in the 19S regulatory particle in eukaryotes or the homologous PAN ATPase complex in archaea. These ATPases contain a conserved C-terminal hydrophobic-tyrosine-X (HbYX) motif that triggers gate opening upon ATP binding. Using cryo-electron microscopy, we identified the sites in the archaeal 20S where PAN's C-terminal residues bind and determined the structures of the gate in its closed and open forms. Peptides containing the HbYX motif bind to 20S in the pockets between neighboring alpha subunits where they interact with conserved residues required for gate opening. This interaction induces a rotation in the alpha subunits and displacement of a reverse-turn loop that stabilizes the open-gate conformation. This mechanism differs from that of PA26/28, which lacks the HbYX motif and does not cause alpha subunit rotation. These findings demonstrated how the ATPases' C termini function to facilitate substrate entry.
-
{{STRUCTURE_3c91| PDB=3c91 | SCENE= }}
+
Mechanism of gate opening in the 20S proteasome by the proteasomal ATPases.,Rabl J, Smith DM, Yu Y, Chang SC, Goldberg AL, Cheng Y Mol Cell. 2008 May 9;30(3):360-8. PMID:18471981<ref>PMID:18471981</ref>
-
===Thermoplasma acidophilum 20S proteasome with an open gate===
+
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-
 
+
</div>
-
{{ABSTRACT_PUBMED_18471981}}
+
== References ==
-
 
+
<references/>
-
==About this Structure==
+
__TOC__
-
[[3c91]] is a 28 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermoplasma_acidophilum Thermoplasma acidophilum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C91 OCA].
+
</StructureSection>
-
 
+
-
==See Also==
+
-
*[[Proteasome|Proteasome]]
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:018471981</ref><references group="xtra"/>
+
[[Category: Proteasome endopeptidase complex]]
[[Category: Proteasome endopeptidase complex]]
-
[[Category: Thermoplasma acidophilum]]
 
[[Category: Chang, S C.]]
[[Category: Chang, S C.]]
[[Category: Cheng, Y.]]
[[Category: Cheng, Y.]]

Revision as of 07:07, 7 May 2014

Thermoplasma acidophilum 20S proteasome with an open gate

3c91, resolution 6.80Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Views
Personal tools
Navigation
Toolbox