3qeb

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[[Image:3qeb.png|left|200px]]
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==Crystal structure of human exonuclease 1 Exo1 (WT) in complex with DNA and Mn2+ (complex III)==
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<StructureSection load='3qeb' size='340' side='right' caption='[[3qeb]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3qeb]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QEB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3QEB FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3qe9|3qe9]], [[3qea|3qea]]</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">EXO1, EXOI, HEX1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3qeb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qeb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3qeb RCSB], [http://www.ebi.ac.uk/pdbsum/3qeb PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Human exonuclease 1 (hExo1) plays important roles in DNA repair and recombination processes that maintain genomic integrity. It is a member of the 5' structure-specific nuclease family of exonucleases and endonucleases that includes FEN-1, XPG, and GEN1. We present structures of hExo1 in complex with a DNA substrate, followed by mutagenesis studies, and propose a common mechanism by which this nuclease family recognizes and processes diverse DNA structures. hExo1 induces a sharp bend in the DNA at nicks or gaps. Frayed 5' ends of nicked duplexes resemble flap junctions, unifying the mechanisms of endo- and exonucleolytic processing. Conformational control of a mobile region in the catalytic site suggests a mechanism for allosteric regulation by binding to protein partners. The relative arrangement of substrate binding sites in these enzymes provides an elegant solution to a complex geometrical puzzle of substrate recognition and processing.
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{{STRUCTURE_3qeb| PDB=3qeb | SCENE= }}
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Structures of human exonuclease 1 DNA complexes suggest a unified mechanism for nuclease family.,Orans J, McSweeney EA, Iyer RR, Hast MA, Hellinga HW, Modrich P, Beese LS Cell. 2011 Apr 15;145(2):212-23. PMID:21496642<ref>PMID:21496642</ref>
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===Crystal structure of human exonuclease 1 Exo1 (WT) in complex with DNA and Mn2+ (complex III)===
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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{{ABSTRACT_PUBMED_21496642}}
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==About this Structure==
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[[3qeb]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QEB OCA].
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==See Also==
==See Also==
*[[Exonuclease|Exonuclease]]
*[[Exonuclease|Exonuclease]]
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== References ==
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==Reference==
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<references/>
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<ref group="xtra">PMID:021496642</ref><references group="xtra"/>
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__TOC__
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</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Beese, L S.]]
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[[Category: Beese, L S]]
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[[Category: Hast, M A.]]
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[[Category: Hast, M A]]
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[[Category: Hellinga, H W.]]
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[[Category: Hellinga, H W]]
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[[Category: Iyer, R R.]]
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[[Category: Iyer, R R]]
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[[Category: McSweeney, E A.]]
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[[Category: McSweeney, E A]]
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[[Category: Modrich, P.]]
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[[Category: Modrich, P]]
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[[Category: Orans, J.]]
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[[Category: Orans, J]]
[[Category: Exonuclease]]
[[Category: Exonuclease]]
[[Category: Hydrolase-dna complex]]
[[Category: Hydrolase-dna complex]]

Revision as of 10:38, 9 December 2014

Crystal structure of human exonuclease 1 Exo1 (WT) in complex with DNA and Mn2+ (complex III)

3qeb, resolution 3.00Å

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