3nlb

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[[Image:3nlb.png|left|200px]]
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==Novel kinase profile highlights the temporal basis of context dependent checkpoint pathways to cell death==
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<StructureSection load='3nlb' size='340' side='right' caption='[[3nlb]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3nlb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NLB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NLB FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=5BE:3-METHYL-5-[5-(1-METHYLETHYL)-1H-BENZIMIDAZOL-2-YL]-N-(1-METHYLPIPERIDIN-4-YL)-1H-PYRAZOLE-4-CARBOXAMIDE'>5BE</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2cgu|2cgu]], [[2cgv|2cgv]], [[2cgw|2cgw]], [[2cgx|2cgx]], [[2c3j|2c3j]], [[2c3k|2c3k]]</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Non-specific_serine/threonine_protein_kinase Non-specific serine/threonine protein kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.11.1 2.7.11.1] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nlb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nlb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3nlb RCSB], [http://www.ebi.ac.uk/pdbsum/3nlb PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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BACKGROUND: Checkpoint kinase 1 and 2 (Chk1/Chk2), and the Aurora kinases play a critical role in the activation of the DNA damage response and mitotic spindle checkpoints. We have identified a novel inhibitor of these kinases and utilized this molecule to probe the functional interplay between these two checkpoints. PRINCIPAL FINDINGS: Fragment screening, structure guided design, and kinase cross screening resulted in the identification of a novel, potent small molecule kinase inhibitor (VER-150548) of Chk1 and Chk2 kinases with IC(50)s of 35 and 34 nM as well as the Aurora A and Aurora B kinases with IC(50)s of 101 and 38 nM. The structural rationale for this kinase specificity could be clearly elucidated through the X-ray crystal structure. In human carcinoma cells, VER-150548 induced reduplication and the accumulation of cells with &gt;4N DNA content, inhibited histone H3 phosphorylation and ultimately gave way to cell death after 120 hour exposure; a phenotype consistent with cellular Aurora inhibition. In the presence of DNA damage induced by cytotoxic chemotherapeutic drugs, VER-150548 abrogated DNA damage induced cell cycle checkpoints. Abrogation of these checkpoints correlated with increased DNA damage and rapid cell death in p53 defective HT29 cells. In the presence of DNA damage, reduplication could not be observed. These observations are consistent with the Chk1 and Chk2 inhibitory activity of this molecule. CONCLUSIONS: In the presence of DNA damage, we suggest that VER-150548 abrogates the DNA damage induced checkpoints forcing cells to undergo a lethal mitosis. The timing of this premature cell death induced by Chk1 inhibition negates Aurora inhibition thereby preventing re-entry into the cell cycle and subsequent DNA reduplication. This novel kinase inhibitor therefore serves as a useful chemical probe to further understand the temporal relationship between cell cycle checkpoint pathways, chemotherapeutic agent induced DNA damage and cell death.
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{{STRUCTURE_3nlb| PDB=3nlb | SCENE= }}
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Context-dependent cell cycle checkpoint abrogation by a novel kinase inhibitor.,Massey AJ, Borgognoni J, Bentley C, Foloppe N, Fiumana A, Walmsley L PLoS One. 2010 Oct 18;5(10):e13123. PMID:20976184<ref>PMID:20976184</ref>
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===Novel kinase profile highlights the temporal basis of context dependent checkpoint pathways to cell death===
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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{{ABSTRACT_PUBMED_20976184}}
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==About this Structure==
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[[3nlb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NLB OCA].
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==See Also==
==See Also==
*[[Serine/threonine protein kinase|Serine/threonine protein kinase]]
*[[Serine/threonine protein kinase|Serine/threonine protein kinase]]
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== References ==
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==Reference==
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<references/>
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<ref group="xtra">PMID:020976184</ref><references group="xtra"/>
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__TOC__
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</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Non-specific serine/threonine protein kinase]]
[[Category: Non-specific serine/threonine protein kinase]]
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[[Category: Bentley, C.]]
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[[Category: Bentley, C]]
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[[Category: Borgognoni, J.]]
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[[Category: Borgognoni, J]]
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[[Category: Fiumana, A.]]
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[[Category: Fiumana, A]]
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[[Category: Foloppe, N.]]
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[[Category: Foloppe, N]]
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[[Category: Massey, A J.]]
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[[Category: Massey, A J]]
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[[Category: Walmsley, L.]]
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[[Category: Walmsley, L]]
[[Category: Atp binding]]
[[Category: Atp binding]]
[[Category: Checkpoint kinase]]
[[Category: Checkpoint kinase]]

Revision as of 11:39, 9 December 2014

Novel kinase profile highlights the temporal basis of context dependent checkpoint pathways to cell death

3nlb, resolution 1.90Å

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