This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3dip
From Proteopedia
| Line 1: | Line 1: | ||
| - | + | ==Crystal structure of an enolase protein from the environmental genome shotgun sequencing of the Sargasso Sea== | |
| - | + | <StructureSection load='3dip' size='340' side='right' caption='[[3dip]], [[Resolution|resolution]] 2.50Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3dip]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Unidentified Unidentified]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DIP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DIP FirstGlance]. <br> | |
| - | + | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br> | |
| - | + | <tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=SIC:(2R)-2-[(3S)-3-AMINO-2,5-DIOXOPYRROLIDIN-1-YL]-3-SULFANYLPROPANOIC+ACID'>SIC</scene></td></tr> | |
| - | + | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dip FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dip OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3dip RCSB], [http://www.ebi.ac.uk/pdbsum/3dip PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3dip TOPSAN]</span></td></tr> | |
| - | == | + | <table> |
| - | [[3dip]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Unidentified Unidentified]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DIP OCA]. | + | == Evolutionary Conservation == |
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/di/3dip_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
*[[Enolase|Enolase]] | *[[Enolase|Enolase]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Unidentified]] | [[Category: Unidentified]] | ||
[[Category: Almo, S C.]] | [[Category: Almo, S C.]] | ||
Revision as of 11:18, 29 September 2014
Crystal structure of an enolase protein from the environmental genome shotgun sequencing of the Sargasso Sea
| |||||||||||
Categories: Unidentified | Almo, S C. | Bain, K T. | Bonanno, J B. | Burley, S K. | Freeman, J. | NYSGXRC, New York SGX Research Center for Structural Genomics. | Ozyurt, S. | Sauder, J M. | Smith, D. | Wasserman, S. | Zhang, F. | Isomerase | Lyase | New york sgx research center for structural genomic | Nysgxrc | Protein structure initiative | Psi-2 | Structural genomic

