This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2hpw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:2hpw.png|left|200px]]
+
==Green fluorescent protein from Clytia gregaria==
-
 
+
<StructureSection load='2hpw' size='340' side='right' caption='[[2hpw]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
-
{{STRUCTURE_2hpw| PDB=2hpw | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2hpw]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Clytia_gregaria Clytia gregaria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HPW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2HPW FirstGlance]. <br>
-
===Green fluorescent protein from Clytia gregaria===
+
</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSY:[(4Z)-2-[(1R)-1-AMINO-2-HYDROXYETHYL]-4-(4-HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC+ACID'>CSY</scene></td></tr>
-
 
+
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GFP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=27801 Clytia gregaria])</td></tr>
-
 
+
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2hpw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hpw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2hpw RCSB], [http://www.ebi.ac.uk/pdbsum/2hpw PDBsum], [http://www.topsan.org/Proteins/SECSG/2hpw TOPSAN]</span></td></tr>
-
==About this Structure==
+
<table>
-
[[2hpw]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Clytia_gregaria Clytia gregaria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HPW OCA].
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hp/2hpw_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Alyssa Marsico/Sandbox 1|Alyssa Marsico/Sandbox 1]]
 
-
*[[Devon McCarthy/Sandbox 1|Devon McCarthy/Sandbox 1]]
 
*[[Green Fluorescent Protein|Green Fluorescent Protein]]
*[[Green Fluorescent Protein|Green Fluorescent Protein]]
-
*[[Sandbox104|Sandbox104]]
+
__TOC__
-
*[[User:Joanne Lau/Sandbox 5|User:Joanne Lau/Sandbox 5]]
+
</StructureSection>
[[Category: Clytia gregaria]]
[[Category: Clytia gregaria]]
[[Category: Lee, J.]]
[[Category: Lee, J.]]

Revision as of 05:39, 3 October 2014

Green fluorescent protein from Clytia gregaria

2hpw, resolution 1.55Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2hpw"
Views
Personal tools
Navigation
Toolbox