1aof
From Proteopedia
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==Overview== | ==Overview== | ||
| - | Cytochrome cd1 nitrite reductase catalyses the conversion of nitrite to, nitric oxide in the nitrogen cycle. The crystal structure of the oxidized, enzyme shows that the d1 haem iron of the active site is ligated by, His/Tyr side chains, and the c haem iron is ligated by a His/His ligand, pair. Here we show that both haems undergo re-ligation during catalysis., Upon reduction, the tyrosine ligand of the d1 haem is released to allow, substrate binding. Concomitantly, a refolding of the cytochrome c domain, takes place, resulting in an unexpected change of the c haem iron, coordination from His 17/His 69 to Met106/His69. This step is similar to, the last steps in the folding of cytochrome c. The changes must affect the, redox potential of the haems, and suggest a mechanism by which ... | + | Cytochrome cd1 nitrite reductase catalyses the conversion of nitrite to, nitric oxide in the nitrogen cycle. The crystal structure of the oxidized, enzyme shows that the d1 haem iron of the active site is ligated by, His/Tyr side chains, and the c haem iron is ligated by a His/His ligand, pair. Here we show that both haems undergo re-ligation during catalysis., Upon reduction, the tyrosine ligand of the d1 haem is released to allow, substrate binding. Concomitantly, a refolding of the cytochrome c domain, takes place, resulting in an unexpected change of the c haem iron, coordination from His 17/His 69 to Met106/His69. This step is similar to, the last steps in the folding of cytochrome c. The changes must affect the, redox potential of the haems, and suggest a mechanism by which internal, electron transfer is regulated. Structures of reaction intermediates show, how nitric oxide is formed and expelled from the active-site iron, as well, as how both haems return to their starting coordination. These results, show how redox energy can be switched into conformational energy within a, haem protein. |
==About this Structure== | ==About this Structure== | ||
| - | 1AOF is a | + | 1AOF is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Paracoccus_pantotrophus Paracoccus pantotrophus] with HEM, DHE and SO2 as [http://en.wikipedia.org/wiki/ligands ligands]. Structure known Active Sites: C1A, C1B, D1A and D1B. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1AOF OCA]. |
==Reference== | ==Reference== | ||
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[[Category: oxidoreductase]] | [[Category: oxidoreductase]] | ||
| - | ''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov 5 13:29:04 2007'' |
Revision as of 11:23, 5 November 2007
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CYTOCHROME CD1 NITRITE REDUCTASE, REDUCED FORM
Overview
Cytochrome cd1 nitrite reductase catalyses the conversion of nitrite to, nitric oxide in the nitrogen cycle. The crystal structure of the oxidized, enzyme shows that the d1 haem iron of the active site is ligated by, His/Tyr side chains, and the c haem iron is ligated by a His/His ligand, pair. Here we show that both haems undergo re-ligation during catalysis., Upon reduction, the tyrosine ligand of the d1 haem is released to allow, substrate binding. Concomitantly, a refolding of the cytochrome c domain, takes place, resulting in an unexpected change of the c haem iron, coordination from His 17/His 69 to Met106/His69. This step is similar to, the last steps in the folding of cytochrome c. The changes must affect the, redox potential of the haems, and suggest a mechanism by which internal, electron transfer is regulated. Structures of reaction intermediates show, how nitric oxide is formed and expelled from the active-site iron, as well, as how both haems return to their starting coordination. These results, show how redox energy can be switched into conformational energy within a, haem protein.
About this Structure
1AOF is a Single protein structure of sequence from Paracoccus pantotrophus with HEM, DHE and SO2 as ligands. Structure known Active Sites: C1A, C1B, D1A and D1B. Full crystallographic information is available from OCA.
Reference
Haem-ligand switching during catalysis in crystals of a nitrogen-cycle enzyme., Williams PA, Fulop V, Garman EF, Saunders NF, Ferguson SJ, Hajdu J, Nature. 1997 Sep 25;389(6649):406-12. PMID:9311786
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