1pie

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[[Image:1pie.gif|left|200px]]<br /><applet load="1pie" size="350" color="white" frame="true" align="right" spinBox="true"
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[[Image:1pie.gif|left|200px]]
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caption="1pie, resolution 2.10&Aring;" />
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'''Crystal Structure of Lactococcus lactis Galactokinase Complexed with Galactose'''<br />
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{{Structure
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|PDB= 1pie |SIZE=350|CAPTION= <scene name='initialview01'>1pie</scene>, resolution 2.10&Aring;
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|SITE=
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|LIGAND= <scene name='pdbligand=GLA:ALPHA+D-GALACTOSE'>GLA</scene> and <scene name='pdbligand=PO4:PHOSPHATE ION'>PO4</scene>
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|ACTIVITY= [http://en.wikipedia.org/wiki/Galactokinase Galactokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.6 2.7.1.6]
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|GENE= GALK ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1358 Lactococcus lactis])
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}}
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'''Crystal Structure of Lactococcus lactis Galactokinase Complexed with Galactose'''
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==Overview==
==Overview==
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==About this Structure==
==About this Structure==
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1PIE is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Lactococcus_lactis Lactococcus lactis] with <scene name='pdbligand=GLA:'>GLA</scene> and <scene name='pdbligand=PO4:'>PO4</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Galactokinase Galactokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.6 2.7.1.6] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PIE OCA].
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1PIE is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Lactococcus_lactis Lactococcus lactis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PIE OCA].
==Reference==
==Reference==
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Molecular structure of galactokinase., Thoden JB, Holden HM, J Biol Chem. 2003 Aug 29;278(35):33305-11. Epub 2003 Jun 9. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=12796487 12796487]
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Molecular structure of galactokinase., Thoden JB, Holden HM, J Biol Chem. 2003 Aug 29;278(35):33305-11. Epub 2003 Jun 9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12796487 12796487]
[[Category: Galactokinase]]
[[Category: Galactokinase]]
[[Category: Lactococcus lactis]]
[[Category: Lactococcus lactis]]
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[[Category: kinase]]
[[Category: kinase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 14:29:10 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 13:24:41 2008''

Revision as of 11:24, 20 March 2008

Image:1pie.gif


PDB ID 1pie

Drag the structure with the mouse to rotate
, resolution 2.10Å
Ligands: and
Gene: GALK (Lactococcus lactis)
Activity: Galactokinase, with EC number 2.7.1.6
Coordinates: save as pdb, mmCIF, xml



Crystal Structure of Lactococcus lactis Galactokinase Complexed with Galactose


Overview

Galactokinase plays a key role in normal galactose metabolism by catalyzing the ATP-dependent phosphorylation of alpha-D-galactose to galactose 1-phosphate. In humans, mutations in the galactokinase gene can lead to the diseased state referred to as Type II galactosemia. Here we describe the three-dimensional structure of galactokinase from Lactococcus lactis determined to 2.1-A resolution. As expected from amino acid sequence alignments, galactokinase adopts a similar topology to that observed for members of the GHMP superfamily. The N-terminal domain is characterized by a five-stranded mixed beta-sheet while the C-terminal motif is dominated by two distinct four-stranded anti-parallel beta-sheets. The structure was solved in the presence of alpha-D-galactose and inorganic phosphate. These ligands are wedged between the N- and C-terminal domains. Amino acid side chains responsible for anchoring the sugar ligand to the protein include Arg36, Glu42, Asp45, Asp183, and Tyr233. Both Arg36 and Asp183 are strictly conserved in the amino acid sequences available in the literature thus far for galactokinases. Interestingly, the carboxylate side chain of Asp183 is positioned within 3.5 A of the C-1 hydroxyl group of galactose, whereas the guanidinium group of Arg36 is situated between both the C-1 hydroxyl group and the inorganic phosphate. Most likely these residues play key roles in catalysis. The structure of galactokinase described here serves as a model for understanding the functional consequences of point mutations known to result in Type II galactosemia in humans.

About this Structure

1PIE is a Single protein structure of sequence from Lactococcus lactis. Full crystallographic information is available from OCA.

Reference

Molecular structure of galactokinase., Thoden JB, Holden HM, J Biol Chem. 2003 Aug 29;278(35):33305-11. Epub 2003 Jun 9. PMID:12796487

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