1qnf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:1qnf.gif|left|200px]]<br /><applet load="1qnf" size="350" color="white" frame="true" align="right" spinBox="true"
+
[[Image:1qnf.gif|left|200px]]
-
caption="1qnf, resolution 1.8&Aring;" />
+
 
-
'''STRUCTURE OF PHOTOLYASE'''<br />
+
{{Structure
 +
|PDB= 1qnf |SIZE=350|CAPTION= <scene name='initialview01'>1qnf</scene>, resolution 1.8&Aring;
 +
|SITE=
 +
|LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene> and <scene name='pdbligand=HDF:8-HYDROXY-10-(D-RIBO-2,3,4,5-TETRAHYDROXYPENTYL)-5-DEAZAISOALLOXAZINE'>HDF</scene>
 +
|ACTIVITY= [http://en.wikipedia.org/wiki/Deoxyribodipyrimidine_photo-lyase Deoxyribodipyrimidine photo-lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.99.3 4.1.99.3]
 +
|GENE=
 +
}}
 +
 
 +
'''STRUCTURE OF PHOTOLYASE'''
 +
 
==Overview==
==Overview==
Line 7: Line 16:
==About this Structure==
==About this Structure==
-
1QNF is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Synechococcus_sp. Synechococcus sp.] with <scene name='pdbligand=FAD:'>FAD</scene> and <scene name='pdbligand=HDF:'>HDF</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Deoxyribodipyrimidine_photo-lyase Deoxyribodipyrimidine photo-lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.99.3 4.1.99.3] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QNF OCA].
+
1QNF is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Synechococcus_sp. Synechococcus sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QNF OCA].
==Reference==
==Reference==
-
Crystal structure of DNA photolyase from Anacystis nidulans., Tamada T, Kitadokoro K, Higuchi Y, Inaka K, Yasui A, de Ruiter PE, Eker AP, Miki K, Nat Struct Biol. 1997 Nov;4(11):887-91. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=9360600 9360600]
+
Crystal structure of DNA photolyase from Anacystis nidulans., Tamada T, Kitadokoro K, Higuchi Y, Inaka K, Yasui A, de Ruiter PE, Eker AP, Miki K, Nat Struct Biol. 1997 Nov;4(11):887-91. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9360600 9360600]
[[Category: Deoxyribodipyrimidine photo-lyase]]
[[Category: Deoxyribodipyrimidine photo-lyase]]
[[Category: Single protein]]
[[Category: Single protein]]
Line 23: Line 32:
[[Category: lyase (carbon-carbon)]]
[[Category: lyase (carbon-carbon)]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 14:41:39 2008''
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 13:40:03 2008''

Revision as of 11:40, 20 March 2008


PDB ID 1qnf

Drag the structure with the mouse to rotate
, resolution 1.8Å
Ligands: and
Activity: Deoxyribodipyrimidine photo-lyase, with EC number 4.1.99.3
Coordinates: save as pdb, mmCIF, xml



STRUCTURE OF PHOTOLYASE


Overview

The crystal structure at 1.8 A resolution of 8-HDF type photolyase from A. nidulans shows a backbone structure similar to that of MTHF type E. coli photolyase but reveals a completely different binding site for the light-harvesting cofactor.

About this Structure

1QNF is a Single protein structure of sequence from Synechococcus sp.. Full crystallographic information is available from OCA.

Reference

Crystal structure of DNA photolyase from Anacystis nidulans., Tamada T, Kitadokoro K, Higuchi Y, Inaka K, Yasui A, de Ruiter PE, Eker AP, Miki K, Nat Struct Biol. 1997 Nov;4(11):887-91. PMID:9360600

Page seeded by OCA on Thu Mar 20 13:40:03 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools