This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1j03
From Proteopedia
(Difference between revisions)
m (Protected "1j03" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | + | ==Solution structure of a putative steroid-binding protein from Arabidopsis== | |
| - | + | <StructureSection load='1j03' size='340' side='right' caption='[[1j03]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1j03]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J03 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1J03 FirstGlance]. <br> | |
| - | + | </td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">At2g24940 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 Arabidopsis thaliana])</td></tr> | |
| - | + | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1j03 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j03 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1j03 RCSB], [http://www.ebi.ac.uk/pdbsum/1j03 PDBsum], [http://www.topsan.org/Proteins/RSGI/1j03 TOPSAN]</span></td></tr> | |
| - | + | <table> | |
| - | == | + | == Evolutionary Conservation == |
| - | [[1j03]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J03 OCA]. | + | [[Image:Consurf_key_small.gif|200px|right]] |
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j0/1j03_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Arabidopsis thaliana]] | [[Category: Arabidopsis thaliana]] | ||
[[Category: Hatanaka, H.]] | [[Category: Hatanaka, H.]] | ||
Revision as of 11:15, 28 September 2014
Solution structure of a putative steroid-binding protein from Arabidopsis
| |||||||||||
Categories: Arabidopsis thaliana | Hatanaka, H. | Kigawa, T. | RSGI, RIKEN Structural Genomics/Proteomics Initiative. | Seki, M. | Shinozaki, K. | Shirouzu, M. | Suzuki, S. | Terada, T. | Yokoyama, S. | Alpha and beta | Riken structural genomics/proteomics initiative | Rsgi | Structural genomic | Unknown function

