4fkh

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[[Image:4fkh.png|left|200px]]
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==Crystal structure of porcine aminopeptidase-N complexed with alanine==
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<StructureSection load='4fkh' size='340' side='right' caption='[[4fkh]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4fkh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4FKH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4FKH FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ALA:ALANINE'>ALA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4fke|4fke]], [[4hol|4hol]], [[4fkk|4fkk]], [[4hom|4hom]]</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ANPEP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9823 Sus scrofa])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Membrane_alanyl_aminopeptidase Membrane alanyl aminopeptidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.11.2 3.4.11.2] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4fkh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4fkh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4fkh RCSB], [http://www.ebi.ac.uk/pdbsum/4fkh PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Mammalian aminopeptidase N (APN) plays multifunctional roles in many physiological processes, including peptide metabolism, cell motility and adhesion, and coronavirus entry. Here we determined crystal structures of porcine APN at 1.85 A resolution and its complexes with a peptide substrate and a variety of inhibitors. APN is a cell surface-anchored and seahorse-shaped zinc-aminopeptidase that forms head-to-head dimers. Captured in a catalytically active state, these structures of APN illustrate a detailed catalytic mechanism for its aminopeptidase activity. The active site and peptide-binding channel of APN reside in cavities with wide openings, allowing easy access to peptides. The cavities can potentially open up further to bind the exposed N terminus of proteins. The active site anchors the N-terminal neutral residue of peptides/proteins, and the peptide-binding channel binds the remainder of the peptides/proteins in a sequence-independent fashion. APN also provides an exposed outer surface for coronavirus binding, without its physiological functions being affected. These structural features enable APN to function ubiquitously in peptide metabolism, interact with other proteins to mediate cell motility and adhesion, and serve as a coronavirus receptor. This study elucidates multifunctional roles of APN and can guide therapeutic efforts to treat APN-related diseases.
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{{STRUCTURE_4fkh| PDB=4fkh | SCENE= }}
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Structural basis for multifunctional roles of mammalian aminopeptidase N.,Chen L, Lin YL, Peng G, Li F Proc Natl Acad Sci U S A. 2012 Oct 30;109(44):17966-71. doi:, 10.1073/pnas.1210123109. Epub 2012 Oct 15. PMID:23071329<ref>PMID:23071329</ref>
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===Crystal structure of porcine aminopeptidase-N complexed with alanine===
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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{{ABSTRACT_PUBMED_23071329}}
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==See Also==
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*[[Aminopeptidase|Aminopeptidase]]
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==About this Structure==
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== References ==
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[[4fkh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4FKH OCA].
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<references/>
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__TOC__
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</StructureSection>
[[Category: Membrane alanyl aminopeptidase]]
[[Category: Membrane alanyl aminopeptidase]]
[[Category: Sus scrofa]]
[[Category: Sus scrofa]]
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[[Category: Chen, L.]]
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[[Category: Chen, L]]
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[[Category: Li, F.]]
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[[Category: Li, F]]
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[[Category: Lin, Y L.]]
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[[Category: Lin, Y L]]
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[[Category: Peng, G.]]
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[[Category: Peng, G]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
[[Category: Zinc aminopeptidase]]
[[Category: Zinc aminopeptidase]]

Revision as of 15:27, 9 December 2014

Crystal structure of porcine aminopeptidase-N complexed with alanine

4fkh, resolution 2.05Å

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