1rut
From Proteopedia
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| - | [[Image:1rut.gif|left|200px]] | + | [[Image:1rut.gif|left|200px]] |
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| - | '''Complex of LMO4 LIM domains 1 and 2 with the ldb1 LID domain''' | + | {{Structure |
| + | |PDB= 1rut |SIZE=350|CAPTION= <scene name='initialview01'>1rut</scene>, resolution 1.30Å | ||
| + | |SITE= | ||
| + | |LIGAND= <scene name='pdbligand=ZN:ZINC ION'>ZN</scene> | ||
| + | |ACTIVITY= | ||
| + | |GENE= lmo4, ldb1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus]) | ||
| + | }} | ||
| + | |||
| + | '''Complex of LMO4 LIM domains 1 and 2 with the ldb1 LID domain''' | ||
| + | |||
==Overview== | ==Overview== | ||
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==About this Structure== | ==About this Structure== | ||
| - | 1RUT is a [ | + | 1RUT is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RUT OCA]. |
==Reference== | ==Reference== | ||
| - | Tandem LIM domains provide synergistic binding in the LMO4:Ldb1 complex., Deane JE, Ryan DP, Sunde M, Maher MJ, Guss JM, Visvader JE, Matthews JM, EMBO J. 2004 Sep 15;23(18):3589-98. Epub 2004 Sep 2. PMID:[http:// | + | Tandem LIM domains provide synergistic binding in the LMO4:Ldb1 complex., Deane JE, Ryan DP, Sunde M, Maher MJ, Guss JM, Visvader JE, Matthews JM, EMBO J. 2004 Sep 15;23(18):3589-98. Epub 2004 Sep 2. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15343268 15343268] |
[[Category: Mus musculus]] | [[Category: Mus musculus]] | ||
[[Category: Single protein]] | [[Category: Single protein]] | ||
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[[Category: lim domain]] | [[Category: lim domain]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 13:56:31 2008'' |
Revision as of 11:56, 20 March 2008
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| , resolution 1.30Å | |||||||
|---|---|---|---|---|---|---|---|
| Ligands: | |||||||
| Gene: | lmo4, ldb1 (Mus musculus) | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
Complex of LMO4 LIM domains 1 and 2 with the ldb1 LID domain
Overview
Nuclear LIM-only (LMO) and LIM-homeodomain (LIM-HD) proteins have important roles in cell fate determination, organ development and oncogenesis. These proteins contain tandemly arrayed LIM domains that bind the LIM interaction domain (LID) of the nuclear adaptor protein LIM domain-binding protein-1 (Ldb1). We have determined a high-resolution X-ray crystal structure of LMO4, a putative breast oncoprotein, in complex with Ldb1-LID, providing the first example of a tandem LIM:Ldb1-LID complex and the first structure of a type-B LIM domain. The complex possesses a highly modular structure with Ldb1-LID binding in an extended manner across both LIM domains of LMO4. The interface contains extensive hydrophobic and electrostatic interactions and multiple backbone-backbone hydrogen bonds. A mutagenic screen of Ldb1-LID, assessed by yeast two-hybrid and competition ELISA analysis, identified key features at the interface and revealed that the interaction is tolerant to mutation. These combined properties provide a mechanism for the binding of Ldb1 to numerous LMO and LIM-HD proteins. Furthermore, the modular extended interface may form a general mode of binding to tandem LIM domains.
About this Structure
1RUT is a Single protein structure of sequence from Mus musculus. Full crystallographic information is available from OCA.
Reference
Tandem LIM domains provide synergistic binding in the LMO4:Ldb1 complex., Deane JE, Ryan DP, Sunde M, Maher MJ, Guss JM, Visvader JE, Matthews JM, EMBO J. 2004 Sep 15;23(18):3589-98. Epub 2004 Sep 2. PMID:15343268
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