1s58
From Proteopedia
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| - | [[Image:1s58.jpg|left|200px]] | + | [[Image:1s58.jpg|left|200px]] |
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| - | '''The structure of B19 parvovirus capsid''' | + | {{Structure |
| + | |PDB= 1s58 |SIZE=350|CAPTION= <scene name='initialview01'>1s58</scene>, resolution 3.5Å | ||
| + | |SITE= | ||
| + | |LIGAND= | ||
| + | |ACTIVITY= | ||
| + | |GENE= vp2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10798 Human parvovirus B19]) | ||
| + | }} | ||
| + | |||
| + | '''The structure of B19 parvovirus capsid''' | ||
| + | |||
==Overview== | ==Overview== | ||
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==About this Structure== | ==About this Structure== | ||
| - | 1S58 is a [ | + | 1S58 is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Human_parvovirus_b19 Human parvovirus b19]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S58 OCA]. |
==Reference== | ==Reference== | ||
| - | The structure of human parvovirus B19., Kaufmann B, Simpson AA, Rossmann MG, Proc Natl Acad Sci U S A. 2004 Aug 10;101(32):11628-33. Epub 2004 Aug 2. PMID:[http:// | + | The structure of human parvovirus B19., Kaufmann B, Simpson AA, Rossmann MG, Proc Natl Acad Sci U S A. 2004 Aug 10;101(32):11628-33. Epub 2004 Aug 2. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15289612 15289612] |
[[Category: Human parvovirus b19]] | [[Category: Human parvovirus b19]] | ||
[[Category: Protein complex]] | [[Category: Protein complex]] | ||
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[[Category: icosahedral virus]] | [[Category: icosahedral virus]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 14:00:38 2008'' |
Revision as of 12:00, 20 March 2008
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| , resolution 3.5Å | |||||||
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| Gene: | vp2 (Human parvovirus B19) | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
The structure of B19 parvovirus capsid
Overview
Human parvovirus B19 is the only parvovirus known to be a human pathogen. The structure of recombinant B19-like particles has been determined to approximately 3.5-A resolution by x-ray crystallography and, to our knowledge, represents the first near-atomic structure of an Erythrovirus. The polypeptide fold of the major capsid protein VP2 is a "jelly roll" with a beta-barrel motif similar to that found in many icosahedral viruses. The large loops connecting the strands of the beta-barrel form surface features that differentiate B19 from other parvoviruses. Although B19 VP2 has only 26% sequence identity to VP3 of adeno-associated virus, 72% of the C(alpha) atoms can be aligned structurally with a rms deviation of 1.8 A. Both viruses require an integrin as a coreceptor, and conserved surface features suggest a common receptor-binding region.
About this Structure
1S58 is a Protein complex structure of sequences from Human parvovirus b19. Full crystallographic information is available from OCA.
Reference
The structure of human parvovirus B19., Kaufmann B, Simpson AA, Rossmann MG, Proc Natl Acad Sci U S A. 2004 Aug 10;101(32):11628-33. Epub 2004 Aug 2. PMID:15289612
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