1pa4

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[[Image:1pa4.png|left|200px]]
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==Solution structure of a putative ribosome-binding factor from Mycoplasma pneumoniae (MPN156)==
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<StructureSection load='1pa4' size='340' side='right' caption='[[1pa4]], [[NMR_Ensembles_of_Models | 16 NMR models]]' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1pa4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mycoplasma_pneumoniae Mycoplasma pneumoniae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PA4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1PA4 FirstGlance]. <br>
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</td></tr><tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1kkg|1kkg]]</td></tr>
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<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MPN156 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2104 Mycoplasma pneumoniae])</td></tr>
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<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1pa4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pa4 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1pa4 RCSB], [http://www.ebi.ac.uk/pdbsum/1pa4 PDBsum], [http://www.topsan.org/Proteins/BSGC/1pa4 TOPSAN]</span></td></tr>
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<table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pa/1pa4_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The solution structure of MPN156, a ribosome-binding factor A (RBFA) protein family member from Mycoplasma pneumoniae, is presented. The structure, solved by nuclear magnetic resonance, has a type II KH fold typical of RNA binding proteins. Despite only approximately 20% sequence identity between MPN156 and another family member from Escherichia coli, the two proteins have high structural similarity. The comparison demonstrates that many of the conserved residues correspond to conserved elements in the structures. Compared to a structure based alignment, standard alignment methods based on sequence alone mispair a majority of amino acids in the two proteins. Implications of these discrepancies for sequence based structural modeling are discussed.
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{{STRUCTURE_1pa4| PDB=1pa4 | SCENE= }}
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Solution structure of a putative ribosome binding protein from Mycoplasma pneumoniae and comparison to a distant homolog.,Rubin SM, Pelton JG, Yokota H, Kim R, Wemmer DE J Struct Funct Genomics. 2003;4(4):235-43. PMID:15185964<ref>PMID:15185964</ref>
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===Solution structure of a putative ribosome-binding factor from Mycoplasma pneumoniae (MPN156)===
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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{{ABSTRACT_PUBMED_15185964}}
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== References ==
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<references/>
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==About this Structure==
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__TOC__
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[[1pa4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mycoplasma_pneumoniae Mycoplasma pneumoniae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PA4 OCA].
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</StructureSection>
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==Reference==
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<ref group="xtra">PMID:015185964</ref><references group="xtra"/>
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[[Category: Mycoplasma pneumoniae]]
[[Category: Mycoplasma pneumoniae]]
[[Category: BSGC, Berkeley Structural Genomics Center.]]
[[Category: BSGC, Berkeley Structural Genomics Center.]]

Revision as of 22:30, 28 September 2014

Solution structure of a putative ribosome-binding factor from Mycoplasma pneumoniae (MPN156)

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