This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1uhw
From Proteopedia
m (Protected "1uhw" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | + | ==Solution structure of the DEP domain of mouse pleckstrin== | |
| - | + | <StructureSection load='1uhw' size='340' side='right' caption='[[1uhw]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1uhw]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UHW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UHW FirstGlance]. <br> | |
| - | + | </td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RIKEN cDNA 1810074L23 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus])</td></tr> | |
| - | + | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1uhw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uhw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1uhw RCSB], [http://www.ebi.ac.uk/pdbsum/1uhw PDBsum], [http://www.topsan.org/Proteins/RSGI/1uhw TOPSAN]</span></td></tr> | |
| - | + | <table> | |
| - | == | + | == Evolutionary Conservation == |
| - | [[1uhw]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UHW OCA]. | + | [[Image:Consurf_key_small.gif|200px|right]] |
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uh/1uhw_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Mus musculus]] | [[Category: Mus musculus]] | ||
[[Category: Aoki, M.]] | [[Category: Aoki, M.]] | ||
Revision as of 18:47, 29 September 2014
Solution structure of the DEP domain of mouse pleckstrin
| |||||||||||
Categories: Mus musculus | Aoki, M. | Arakawa, T. | Carninci, P. | Hatta, R. | Hayashi, F. | Hayashizaki, Y. | Hirota, H. | Inoue, K. | Inoue, M. | Kawai, J. | Kigawa, T. | Matsuda, T. | Matsuo, Y. | Osanai, T. | RSGI, RIKEN Structural Genomics/Proteomics Initiative. | Seki, E. | Shirouzu, M. | Tanaka, A. | Terada, T. | Yabuki, T. | Yokoyama, S. | Yoshida, M. | Beta-arm | Pleckstrin | Riken structural genomics/proteomics initiative | Rsgi | Signaling protein | Structural genomic | Three-helix bundle

