2dm4
From Proteopedia
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- | + | ==Solution structure of the second fn3 domain of human sorLA/LR11== | |
- | + | <StructureSection load='2dm4' size='340' side='right' caption='[[2dm4]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[2dm4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DM4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DM4 FirstGlance]. <br> | |
- | + | </td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SORL1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr> | |
- | + | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dm4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dm4 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2dm4 RCSB], [http://www.ebi.ac.uk/pdbsum/2dm4 PDBsum], [http://www.topsan.org/Proteins/RSGI/2dm4 TOPSAN]</span></td></tr> | |
- | + | <table> | |
- | == | + | == Evolutionary Conservation == |
- | [[2dm4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DM4 OCA]. | + | [[Image:Consurf_key_small.gif|200px|right]] |
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dm/2dm4_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
[[Category: Hayashi, F.]] | [[Category: Hayashi, F.]] |
Revision as of 01:49, 30 September 2014
Solution structure of the second fn3 domain of human sorLA/LR11
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Categories: Homo sapiens | Hayashi, F. | Kurosaki, C. | Nagashima, T. | RSGI, RIKEN Structural Genomics/Proteomics Initiative. | Yokoyama, S. | Yoshida, M. | Alzheimer's disease | App | Bace1 | Beta-sandwich | Lipid transport | Low-density lipoprotein receptor relative with 11 ligand-binding repeat | Lr11 | National project on protein structural and functional analyse | Nppsfa | Riken structural genomics/proteomics initiative | Rsgi | Sorla | Sorting protein-related receptor containing ldlr class a repeat | Structural genomic