This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2d9y

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2d9y" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:2d9y.png|left|200px]]
+
==Solution structure of the PH domain of PEPP-3 from human==
-
 
+
<StructureSection load='2d9y' size='340' side='right' caption='[[2d9y]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
-
{{STRUCTURE_2d9y| PDB=2d9y | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2d9y]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D9Y OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2D9Y FirstGlance]. <br>
-
===Solution structure of the PH domain of PEPP-3 from human===
+
</td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PLEKHA6 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
-
 
+
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2d9y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d9y OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2d9y RCSB], [http://www.ebi.ac.uk/pdbsum/2d9y PDBsum], [http://www.topsan.org/Proteins/RSGI/2d9y TOPSAN]</span></td></tr>
-
 
+
<table>
-
==About this Structure==
+
== Evolutionary Conservation ==
-
[[2d9y]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D9Y OCA].
+
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d9/2d9y_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Inoue, M.]]
[[Category: Inoue, M.]]

Revision as of 02:58, 30 September 2014

Solution structure of the PH domain of PEPP-3 from human

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Views
Personal tools
Navigation
Toolbox