We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

2nyg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2nyg" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:2nyg.png|left|200px]]
+
==Crystal structure of YokD protein from Bacillus subtilis==
-
 
+
<StructureSection load='2nyg' size='340' side='right' caption='[[2nyg]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-
{{STRUCTURE_2nyg| PDB=2nyg | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2nyg]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NYG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2NYG FirstGlance]. <br>
-
===Crystal structure of YokD protein from Bacillus subtilis===
+
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=COA:COENZYME+A'>COA</scene><br>
-
 
+
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yokD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 Bacillus subtilis])</td></tr>
-
 
+
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2nyg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nyg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2nyg RCSB], [http://www.ebi.ac.uk/pdbsum/2nyg PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2nyg TOPSAN]</span></td></tr>
-
==About this Structure==
+
<table>
-
[[2nyg]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NYG OCA].
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ny/2nyg_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
[[Category: Burley, S K.]]
[[Category: Burley, S K.]]

Revision as of 18:35, 30 September 2014

Crystal structure of YokD protein from Bacillus subtilis

2nyg, resolution 2.60Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2nyg"
Views
Personal tools
Navigation
Toolbox