This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2joe
From Proteopedia
m (Protected "2joe" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | + | ==NMR Structure of E. Coli YehR Protein. Northeast Structural Genomics Target ER538.== | |
| - | + | <StructureSection load='2joe' size='340' side='right' caption='[[2joe]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2joe]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JOE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JOE FirstGlance]. <br> | |
| - | + | </td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yehR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr> | |
| - | + | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2joe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2joe OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2joe RCSB], [http://www.ebi.ac.uk/pdbsum/2joe PDBsum], [http://www.topsan.org/Proteins/NESGC/2joe TOPSAN]</span></td></tr> | |
| - | + | <table> | |
| - | == | + | == Evolutionary Conservation == |
| - | [[2joe]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JOE OCA]. | + | [[Image:Consurf_key_small.gif|200px|right]] |
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jo/2joe_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Escherichia coli]] | [[Category: Escherichia coli]] | ||
[[Category: Acton, T B.]] | [[Category: Acton, T B.]] | ||
Revision as of 07:59, 30 September 2014
NMR Structure of E. Coli YehR Protein. Northeast Structural Genomics Target ER538.
| |||||||||||
Categories: Escherichia coli | Acton, T B. | Baran, M C. | Chen, C X. | Cort, J R. | Cunningham, K. | Ding, K. | Jiang, M. | Kennedy, M A. | Liu, J. | Ma, L. | Montelione, G T. | NESG, Northeast Structural Genomics Consortium. | Ramelot, T A. | Rost, B. | Swapna, G V.T. | Xiao, R. | Alpha + beta sandwich | Nesg | Northeast structural genomics consortium | Protein structure initiative | Psi-2 | Six antiparallel beta strand | Structural genomic | Unknown function

