This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2k5g

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2k5g" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:2k5g.png|left|200px]]
+
==Solution NMR structure of protein encoded by gene BPP1335 from Bordetella parapertussis: Northeast Structural Genomics Target BpR195==
-
 
+
<StructureSection load='2k5g' size='340' side='right' caption='[[2k5g]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
-
{{STRUCTURE_2k5g| PDB=2k5g | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2k5g]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bordetella_parapertussis Bordetella parapertussis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K5G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2K5G FirstGlance]. <br>
-
===Solution NMR structure of protein encoded by gene BPP1335 from Bordetella parapertussis: Northeast Structural Genomics Target BpR195===
+
</td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BPP1335 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=519 Bordetella parapertussis])</td></tr>
-
 
+
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2k5g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k5g OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2k5g RCSB], [http://www.ebi.ac.uk/pdbsum/2k5g PDBsum], [http://www.topsan.org/Proteins/NESGC/2k5g TOPSAN]</span></td></tr>
-
 
+
<table>
-
==About this Structure==
+
== Evolutionary Conservation ==
-
[[2k5g]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bordetella_parapertussis Bordetella parapertussis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K5G OCA].
+
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k5/2k5g_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Bordetella parapertussis]]
[[Category: Bordetella parapertussis]]
[[Category: Acton, T B.]]
[[Category: Acton, T B.]]

Revision as of 08:14, 30 September 2014

Solution NMR structure of protein encoded by gene BPP1335 from Bordetella parapertussis: Northeast Structural Genomics Target BpR195

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2k5g"
Views
Personal tools
Navigation
Toolbox