This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2k5d
From Proteopedia
m (Protected "2k5d" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | + | ==SOLUTION NMR STRUCTURE OF SAG0934 from Streptococcus agalactiae. NORTHEAST STRUCTURAL GENOMICS TARGET SaR32[1-108].== | |
| - | + | <StructureSection load='2k5d' size='340' side='right' caption='[[2k5d]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2k5d]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_agalactiae_serogroup_v Streptococcus agalactiae serogroup v]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K5D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2K5D FirstGlance]. <br> | |
| - | + | </td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SAG0934 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=216466 Streptococcus agalactiae serogroup V])</td></tr> | |
| - | + | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2k5d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k5d OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2k5d RCSB], [http://www.ebi.ac.uk/pdbsum/2k5d PDBsum], [http://www.topsan.org/Proteins/NESGC/2k5d TOPSAN]</span></td></tr> | |
| - | + | <table> | |
| - | == | + | == Evolutionary Conservation == |
| - | [[2k5d]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_agalactiae_serogroup_v Streptococcus agalactiae serogroup v]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K5D OCA]. | + | [[Image:Consurf_key_small.gif|200px|right]] |
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k5/2k5d_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Streptococcus agalactiae serogroup v]] | [[Category: Streptococcus agalactiae serogroup v]] | ||
[[Category: Acton, T B.]] | [[Category: Acton, T B.]] | ||
Revision as of 09:20, 30 September 2014
SOLUTION NMR STRUCTURE OF SAG0934 from Streptococcus agalactiae. NORTHEAST STRUCTURAL GENOMICS TARGET SaR32[1-108].
| |||||||||||
Categories: Streptococcus agalactiae serogroup v | Acton, T B. | Aramini, J M. | Everett, J K. | Foote, E L. | Jiang, M. | Montelione, G T. | NESG, Northeast Structural Genomics Consortium. | Nair, R. | Rossi, P. | Rost, B. | Sharma, S. | Swapna, G VT. | Xiao, R. | Zhao, L. | Construct optimized | Duf961 | Nesg | Northeast structural genomics consortium | Primosomal protein | Protein structure initiative | Psi-2 | Solution nmr structure | Structural genomic | Unknown function

