This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2i6d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2i6d" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:2i6d.png|left|200px]]
+
==The structure of a putative RNA methyltransferase of the TrmH family from Porphyromonas gingivalis.==
-
 
+
<StructureSection load='2i6d' size='340' side='right' caption='[[2i6d]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
-
{{STRUCTURE_2i6d| PDB=2i6d | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2i6d]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Porphyromonas_gingivalis Porphyromonas gingivalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I6D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2I6D FirstGlance]. <br>
-
===The structure of a putative RNA methyltransferase of the TrmH family from Porphyromonas gingivalis.===
+
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene><br>
-
 
+
<tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
 
+
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SpoU, PG_0744 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=837 Porphyromonas gingivalis])</td></tr>
-
==About this Structure==
+
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2i6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i6d OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2i6d RCSB], [http://www.ebi.ac.uk/pdbsum/2i6d PDBsum], [http://www.topsan.org/Proteins/MCSG/2i6d TOPSAN]</span></td></tr>
-
[[2i6d]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Porphyromonas_gingivalis Porphyromonas gingivalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I6D OCA].
+
<table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i6/2i6d_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Porphyromonas gingivalis]]
[[Category: Porphyromonas gingivalis]]
[[Category: Cuff, M E.]]
[[Category: Cuff, M E.]]

Revision as of 10:19, 30 September 2014

The structure of a putative RNA methyltransferase of the TrmH family from Porphyromonas gingivalis.

2i6d, resolution 1.85Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2i6d"
Views
Personal tools
Navigation
Toolbox