3cz8
From Proteopedia
(Difference between revisions)
m (Protected "3cz8" [edit=sysop:move=sysop]) |
|||
Line 1: | Line 1: | ||
- | + | ==Crystal structure of putative sporulation-specific glycosylase ydhD from Bacillus subtilis== | |
- | + | <StructureSection load='3cz8' size='340' side='right' caption='[[3cz8]], [[Resolution|resolution]] 2.20Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[3cz8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CZ8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3CZ8 FirstGlance]. <br> | |
- | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | |
- | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ydhD, BSU05710 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224308 Bacillus subtilis subsp. subtilis str. 168])</td></tr> | |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cz8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3cz8 RCSB], [http://www.ebi.ac.uk/pdbsum/3cz8 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3cz8 TOPSAN]</span></td></tr> | |
- | == | + | </table> |
- | [[3cz8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CZ8 OCA]. | + | == Evolutionary Conservation == |
+ | [[Image:Consurf_key_small.gif|200px|right]] | ||
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cz/3cz8_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
[[Category: Bacillus subtilis subsp. subtilis str. 168]] | [[Category: Bacillus subtilis subsp. subtilis str. 168]] | ||
[[Category: Almo, S C.]] | [[Category: Almo, S C.]] |
Revision as of 09:27, 5 November 2014
Crystal structure of putative sporulation-specific glycosylase ydhD from Bacillus subtilis
|
Categories: Bacillus subtilis subsp. subtilis str. 168 | Almo, S C. | Burley, S K. | Chang, S. | Maletic, M. | NYSGXRC, New York SGX Research Center for Structural Genomics. | Patskovsky, Y. | Romero, R. | Rutter, M. | Sauder, J M. | Smith, D. | Wasserman, S R. | Carbohydrate metabolism | Glycosidase | Hydrolase | New york sgx research center for structural genomic | Nysgxrc | Polysaccharide degradation | Protein structure initiative | Psi-2 | Sporulation | Structural genomic | Uncharacterized protein