This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3cmg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3cmg" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:3cmg.png|left|200px]]
+
==Crystal structure of putative beta-galactosidase from Bacteroides fragilis==
-
 
+
<StructureSection load='3cmg' size='340' side='right' caption='[[3cmg]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
{{STRUCTURE_3cmg| PDB=3cmg | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3cmg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_fragilis_nctc_9343 Bacteroides fragilis nctc 9343]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CMG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3CMG FirstGlance]. <br>
-
===Crystal structure of putative beta-galactosidase from Bacteroides fragilis===
+
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene><br>
-
 
+
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BF0328 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272559 Bacteroides fragilis NCTC 9343])</td></tr>
-
 
+
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cmg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cmg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3cmg RCSB], [http://www.ebi.ac.uk/pdbsum/3cmg PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3cmg TOPSAN]</span></td></tr>
-
==About this Structure==
+
<table>
-
[[3cmg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_fragilis_nctc_9343 Bacteroides fragilis nctc 9343]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CMG OCA].
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cm/3cmg_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Bacteroides fragilis nctc 9343]]
[[Category: Bacteroides fragilis nctc 9343]]
[[Category: Almo, S C.]]
[[Category: Almo, S C.]]

Revision as of 20:54, 2 October 2014

Crystal structure of putative beta-galactosidase from Bacteroides fragilis

3cmg, resolution 1.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Views
Personal tools
Navigation
Toolbox