This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2qya
From Proteopedia
m (Protected "2qya" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | + | ==Crystal structure of an uncharacterized conserved protein from Methanopyrus kandleri== | |
| - | + | <StructureSection load='2qya' size='340' side='right' caption='[[2qya]], [[Resolution|resolution]] 2.17Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2qya]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanopyrus_kandleri_av19 Methanopyrus kandleri av19]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QYA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2QYA FirstGlance]. <br> | |
| - | + | </td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MK0968 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=190192 Methanopyrus kandleri AV19])</td></tr> | |
| - | + | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qya FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qya OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2qya RCSB], [http://www.ebi.ac.uk/pdbsum/2qya PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2qya TOPSAN]</span></td></tr> | |
| - | + | <table> | |
| - | == | + | == Evolutionary Conservation == |
| - | [[2qya]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanopyrus_kandleri_av19 Methanopyrus kandleri av19]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QYA OCA]. | + | [[Image:Consurf_key_small.gif|200px|right]] |
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qy/2qya_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Methanopyrus kandleri av19]] | [[Category: Methanopyrus kandleri av19]] | ||
[[Category: Adams, J.]] | [[Category: Adams, J.]] | ||
Revision as of 18:43, 30 September 2014
Crystal structure of an uncharacterized conserved protein from Methanopyrus kandleri
| |||||||||||
Categories: Methanopyrus kandleri av19 | Adams, J. | Almo, S C. | Bain, K T. | Bonanno, J B. | Burley, S K. | NYSGXRC, New York SGX Research Center for Structural Genomics. | Ozyurt, S. | Sauder, J M. | Smith, D. | Wasserman, S. | Zhang, A. | New york sgx research center for structural genomic | Nysgxrc | Protein structure initiative | Psi-2 | Structural genomic | Unknown function

