3d3u
From Proteopedia
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- | + | ==Crystal structure of 4-hydroxybutyrate CoA-transferase (abfT-2) from Porphyromonas gingivalis. Northeast Structural Genomics Consortium target PgR26== | |
- | + | <StructureSection load='3d3u' size='340' side='right' caption='[[3d3u]], [[Resolution|resolution]] 2.80Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[3d3u]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Porphyromonas_gingivalis Porphyromonas gingivalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D3U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3D3U FirstGlance]. <br> | |
- | + | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">abfT-2, PG_1956 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=837 Porphyromonas gingivalis])</td></tr> | |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3d3u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d3u OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3d3u RCSB], [http://www.ebi.ac.uk/pdbsum/3d3u PDBsum], [http://www.topsan.org/Proteins/NESGC/3d3u TOPSAN]</span></td></tr> | |
- | + | </table> | |
- | == | + | == Evolutionary Conservation == |
- | [[3d3u]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Porphyromonas_gingivalis Porphyromonas gingivalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D3U OCA]. | + | [[Image:Consurf_key_small.gif|200px|right]] |
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d3/3d3u_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
[[Category: Porphyromonas gingivalis]] | [[Category: Porphyromonas gingivalis]] | ||
- | [[Category: Acton, T B | + | [[Category: Acton, T B]] |
- | [[Category: Conover, K | + | [[Category: Conover, K]] |
- | [[Category: Cunningham, K | + | [[Category: Cunningham, K]] |
- | [[Category: Everett, J K | + | [[Category: Everett, J K]] |
- | [[Category: Forouhar, F | + | [[Category: Forouhar, F]] |
- | [[Category: Ho, C K | + | [[Category: Ho, C K]] |
- | [[Category: Hunt, J F | + | [[Category: Hunt, J F]] |
- | [[Category: Hussain, M | + | [[Category: Hussain, M]] |
- | [[Category: II, W N.Price | + | [[Category: II, W N.Price]] |
- | [[Category: Ma, L-C | + | [[Category: Ma, L-C]] |
- | [[Category: Montelione, G T | + | [[Category: Montelione, G T]] |
- | [[Category: | + | [[Category: Structural genomic]] |
- | [[Category: Neely, H | + | [[Category: Neely, H]] |
- | [[Category: Seetharaman, J | + | [[Category: Seetharaman, J]] |
- | [[Category: Tong, L | + | [[Category: Tong, L]] |
- | [[Category: Xiao, R | + | [[Category: Xiao, R]] |
- | [[Category: Zhang, X-Z | + | [[Category: Zhang, X-Z]] |
[[Category: Alpha-beta protein]] | [[Category: Alpha-beta protein]] | ||
[[Category: Nesg]] | [[Category: Nesg]] | ||
- | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
- | + | ||
- | + | ||
- | + | ||
[[Category: Transferase]] | [[Category: Transferase]] |
Revision as of 08:05, 12 November 2014
Crystal structure of 4-hydroxybutyrate CoA-transferase (abfT-2) from Porphyromonas gingivalis. Northeast Structural Genomics Consortium target PgR26
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Categories: Porphyromonas gingivalis | Acton, T B | Conover, K | Cunningham, K | Everett, J K | Forouhar, F | Ho, C K | Hunt, J F | Hussain, M | II, W N.Price | Ma, L-C | Montelione, G T | Structural genomic | Neely, H | Seetharaman, J | Tong, L | Xiao, R | Zhang, X-Z | Alpha-beta protein | Nesg | PSI, Protein structure initiative | Transferase