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1y0z

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[[Image:1y0z.gif|left|200px]]<br /><applet load="1y0z" size="350" color="white" frame="true" align="right" spinBox="true"
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[[Image:1y0z.gif|left|200px]]
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caption="1y0z, resolution 2.40&Aring;" />
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'''X-ray structure of gene product from Arabidopsis thaliana At3g21360'''<br />
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{{Structure
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|PDB= 1y0z |SIZE=350|CAPTION= <scene name='initialview01'>1y0z</scene>, resolution 2.40&Aring;
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|SITE=
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|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> and <scene name='pdbligand=FE2:FE (II) ION'>FE2</scene>
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|ACTIVITY=
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|GENE= At3g21360 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 Arabidopsis thaliana])
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}}
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'''X-ray structure of gene product from Arabidopsis thaliana At3g21360'''
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==Overview==
==Overview==
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==About this Structure==
==About this Structure==
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1Y0Z is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana] with <scene name='pdbligand=SO4:'>SO4</scene> and <scene name='pdbligand=FE2:'>FE2</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y0Z OCA].
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1Y0Z is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y0Z OCA].
==Reference==
==Reference==
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The structure at 2.4 A resolution of the protein from gene locus At3g21360, a putative Fe(II)/2-oxoglutarate-dependent enzyme from Arabidopsis thaliana., Bitto E, Bingman CA, Allard ST, Wesenberg GE, Aceti DJ, Wrobel RL, Frederick RO, Sreenath H, Vojtik FC, Jeon WB, Newman CS, Primm J, Sussman MR, Fox BG, Markley JL, Phillips GN Jr, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 May 1;61(Pt, 5):469-72. Epub 2005 Apr 26. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=16511070 16511070]
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The structure at 2.4 A resolution of the protein from gene locus At3g21360, a putative Fe(II)/2-oxoglutarate-dependent enzyme from Arabidopsis thaliana., Bitto E, Bingman CA, Allard ST, Wesenberg GE, Aceti DJ, Wrobel RL, Frederick RO, Sreenath H, Vojtik FC, Jeon WB, Newman CS, Primm J, Sussman MR, Fox BG, Markley JL, Phillips GN Jr, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 May 1;61(Pt, 5):469-72. Epub 2005 Apr 26. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16511070 16511070]
[[Category: Arabidopsis thaliana]]
[[Category: Arabidopsis thaliana]]
[[Category: Single protein]]
[[Category: Single protein]]
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[[Category: SO4]]
[[Category: SO4]]
[[Category: at3g21360]]
[[Category: at3g21360]]
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[[Category: center for eukaryotic structural genomics]]
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[[Category: center for eukaryotic structural genomic]]
[[Category: cesg]]
[[Category: cesg]]
[[Category: protein structure initiative]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: psi]]
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[[Category: structural genomics]]
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[[Category: structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:00:41 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 15:17:05 2008''

Revision as of 13:17, 20 March 2008

Image:1y0z.gif


PDB ID 1y0z

Drag the structure with the mouse to rotate
, resolution 2.40Å
Ligands: and
Gene: At3g21360 (Arabidopsis thaliana)
Coordinates: save as pdb, mmCIF, xml



X-ray structure of gene product from Arabidopsis thaliana At3g21360


Overview

The crystal structure of the gene product of At3g21360 from Arabidopsis thaliana was determined by the single-wavelength anomalous dispersion method and refined to an R factor of 19.3% (Rfree = 24.1%) at 2.4 A resolution. The crystal structure includes two monomers in the asymmetric unit that differ in the conformation of a flexible domain that spans residues 178-230. The crystal structure confirmed that At3g21360 encodes a protein belonging to the clavaminate synthase-like superfamily of iron(II) and 2-oxoglutarate-dependent enzymes. The metal-binding site was defined and is similar to the iron(II) binding sites found in other members of the superfamily.

About this Structure

1Y0Z is a Single protein structure of sequence from Arabidopsis thaliana. Full crystallographic information is available from OCA.

Reference

The structure at 2.4 A resolution of the protein from gene locus At3g21360, a putative Fe(II)/2-oxoglutarate-dependent enzyme from Arabidopsis thaliana., Bitto E, Bingman CA, Allard ST, Wesenberg GE, Aceti DJ, Wrobel RL, Frederick RO, Sreenath H, Vojtik FC, Jeon WB, Newman CS, Primm J, Sussman MR, Fox BG, Markley JL, Phillips GN Jr, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 May 1;61(Pt, 5):469-72. Epub 2005 Apr 26. PMID:16511070

Page seeded by OCA on Thu Mar 20 15:17:05 2008

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