This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1y5a

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:1y5a.gif|left|200px]]<br /><applet load="1y5a" size="350" color="white" frame="true" align="right" spinBox="true"
+
[[Image:1y5a.gif|left|200px]]
-
caption="1y5a, resolution 1.40&Aring;" />
+
 
-
'''Dianhydrosugar-based benzamidine, factor Xa specific inhibitor in complex with bovine trypsin mutant'''<br />
+
{{Structure
 +
|PDB= 1y5a |SIZE=350|CAPTION= <scene name='initialview01'>1y5a</scene>, resolution 1.40&Aring;
 +
|SITE=
 +
|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=TL2:2-O-{4-[AMINO(IMINO)METHYL]PHENYL}-5-O-{3-[AMINO(IMINO)METHYL]PHENYL}-1,4:3,6-DIANHYDRO-D-GLUCITOL'>TL2</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene> and <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
 +
|ACTIVITY= [http://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4]
 +
|GENE=
 +
}}
 +
 
 +
'''Dianhydrosugar-based benzamidine, factor Xa specific inhibitor in complex with bovine trypsin mutant'''
 +
 
==About this Structure==
==About this Structure==
-
1Y5A is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus] with <scene name='pdbligand=SO4:'>SO4</scene>, <scene name='pdbligand=CA:'>CA</scene>, <scene name='pdbligand=TL2:'>TL2</scene>, <scene name='pdbligand=IMD:'>IMD</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y5A OCA].
+
1Y5A is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y5A OCA].
[[Category: Bos taurus]]
[[Category: Bos taurus]]
[[Category: Single protein]]
[[Category: Single protein]]
Line 20: Line 29:
[[Category: serine proteinase]]
[[Category: serine proteinase]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:01:55 2008''
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 15:18:37 2008''

Revision as of 13:18, 20 March 2008


PDB ID 1y5a

Drag the structure with the mouse to rotate
, resolution 1.40Å
Ligands: , , , and
Activity: Trypsin, with EC number 3.4.21.4
Coordinates: save as pdb, mmCIF, xml



Dianhydrosugar-based benzamidine, factor Xa specific inhibitor in complex with bovine trypsin mutant


About this Structure

1Y5A is a Single protein structure of sequence from Bos taurus. Full crystallographic information is available from OCA.

Page seeded by OCA on Thu Mar 20 15:18:37 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools