This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3e57
From Proteopedia
(Difference between revisions)
m (Protected "3e57" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | + | ==Crystal structure of Tm1382, a putative Nudix hydrolase== | |
| - | + | <StructureSection load='3e57' size='340' side='right' caption='[[3e57]], [[Resolution|resolution]] 1.89Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3e57]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E57 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3E57 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TM_1382 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 Thermotoga maritima])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3e57 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e57 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3e57 RCSB], [http://www.ebi.ac.uk/pdbsum/3e57 PDBsum]</span></td></tr> | |
| - | + | </table> | |
| - | == | + | == Evolutionary Conservation == |
| - | [[3e57]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E57 OCA]. | + | [[Image:Consurf_key_small.gif|200px|right]] |
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e5/3e57_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Thermotoga maritima]] | [[Category: Thermotoga maritima]] | ||
| - | [[Category: Choi, W | + | [[Category: Choi, W]] |
| - | [[Category: Cooper, D R | + | [[Category: Cooper, D R]] |
| - | [[Category: Derewenda, Z S | + | [[Category: Derewenda, Z S]] |
| - | [[Category: ISFI, Integrated Center for Structure and Function Innovation | + | [[Category: ISFI, Integrated Center for Structure and Function Innovation]] |
[[Category: Integrated center for structure and function innovation]] | [[Category: Integrated center for structure and function innovation]] | ||
[[Category: Isfi]] | [[Category: Isfi]] | ||
[[Category: Nudix hydrolase]] | [[Category: Nudix hydrolase]] | ||
| - | [[Category: Protein structure initiative | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
[[Category: Structural genomic]] | [[Category: Structural genomic]] | ||
[[Category: Tm1382]] | [[Category: Tm1382]] | ||
[[Category: Unknown function]] | [[Category: Unknown function]] | ||
Revision as of 13:14, 19 November 2014
Crystal structure of Tm1382, a putative Nudix hydrolase
| |||||||||||
Categories: Thermotoga maritima | Choi, W | Cooper, D R | Derewenda, Z S | ISFI, Integrated Center for Structure and Function Innovation | Integrated center for structure and function innovation | Isfi | Nudix hydrolase | PSI, Protein structure initiative | Structural genomic | Tm1382 | Unknown function
