3edm
From Proteopedia
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| - | + | ==Crystal structure of a short chain dehydrogenase from Agrobacterium tumefaciens== | |
| - | + | <StructureSection load='3edm' size='340' side='right' caption='[[3edm]], [[Resolution|resolution]] 2.30Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3edm]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EDM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3EDM FirstGlance]. <br> | |
| - | + | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AGR_L_3556, Atu3026 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 Agrobacterium tumefaciens str. C58])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3edm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3edm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3edm RCSB], [http://www.ebi.ac.uk/pdbsum/3edm PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3edm TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | == | + | == Evolutionary Conservation == |
| - | [[3edm]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EDM OCA]. | + | [[Image:Consurf_key_small.gif|200px|right]] |
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ed/3edm_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Agrobacterium tumefaciens str. c58]] | [[Category: Agrobacterium tumefaciens str. c58]] | ||
| - | [[Category: Almo, S C | + | [[Category: Almo, S C]] |
| - | [[Category: Bain, K T | + | [[Category: Bain, K T]] |
| - | [[Category: Bonanno, J B | + | [[Category: Bonanno, J B]] |
| - | [[Category: Burley, S K | + | [[Category: Burley, S K]] |
| - | [[Category: Chang, S | + | [[Category: Chang, S]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | [[Category: Romero, R | + | [[Category: Romero, R]] |
| - | [[Category: Rutter, M | + | [[Category: Rutter, M]] |
| - | [[Category: Sauder, J M | + | [[Category: Sauder, J M]] |
| - | [[Category: Wasserman, S | + | [[Category: Wasserman, S]] |
[[Category: Dehydrogenase]] | [[Category: Dehydrogenase]] | ||
| - | [[Category: New | + | [[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]] |
| - | + | ||
[[Category: Oxidoreductase]] | [[Category: Oxidoreductase]] | ||
| - | [[Category: Protein structure initiative | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
Revision as of 13:37, 6 November 2014
Crystal structure of a short chain dehydrogenase from Agrobacterium tumefaciens
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Categories: Agrobacterium tumefaciens str. c58 | Almo, S C | Bain, K T | Bonanno, J B | Burley, S K | Chang, S | Structural genomic | Romero, R | Rutter, M | Sauder, J M | Wasserman, S | Dehydrogenase | NYSGXRC, New York SGX Research Center for Structural Genomics | Oxidoreductase | PSI, Protein structure initiative
