This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3dtd
From Proteopedia
(Difference between revisions)
m (Protected "3dtd" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | + | ==Crystal structure of invasion associated protein b from bartonella henselae== | |
| - | + | <StructureSection load='3dtd' size='340' side='right' caption='[[3dtd]], [[Resolution|resolution]] 2.35Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3dtd]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Bartonella_henselae Bartonella henselae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DTD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DTD FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">invB, BH01650 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=38323 Bartonella henselae])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dtd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dtd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3dtd RCSB], [http://www.ebi.ac.uk/pdbsum/3dtd PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3dtd TOPSAN]</span></td></tr> | |
| - | == | + | </table> |
| - | [[3dtd]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Bartonella_henselae Bartonella henselae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DTD OCA]. | + | == Evolutionary Conservation == |
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dt/3dtd_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Bartonella henselae]] | [[Category: Bartonella henselae]] | ||
| - | [[Category: Almo, S C | + | [[Category: Almo, S C]] |
| - | [[Category: Burley, S K | + | [[Category: Burley, S K]] |
| - | [[Category: Freeman, J | + | [[Category: Freeman, J]] |
| - | [[Category: Groshong, C | + | [[Category: Groshong, C]] |
| - | [[Category: Koss, J | + | [[Category: Koss, J]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
[[Category: Structural genomic]] | [[Category: Structural genomic]] | ||
| + | [[Category: Ozyurt, S]] | ||
| + | [[Category: Patskovsky, Y]] | ||
| + | [[Category: Sauder, J M]] | ||
| + | [[Category: Slocombe, A]] | ||
| + | [[Category: Smith, D]] | ||
| + | [[Category: Wasserman, S]] | ||
| + | [[Category: Invasion associated protein]] | ||
| + | [[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
[[Category: Unknown function]] | [[Category: Unknown function]] | ||
Revision as of 13:43, 6 November 2014
Crystal structure of invasion associated protein b from bartonella henselae
| |||||||||||
Categories: Bartonella henselae | Almo, S C | Burley, S K | Freeman, J | Groshong, C | Koss, J | Structural genomic | Ozyurt, S | Patskovsky, Y | Sauder, J M | Slocombe, A | Smith, D | Wasserman, S | Invasion associated protein | NYSGXRC, New York SGX Research Center for Structural Genomics | PSI, Protein structure initiative | Unknown function
