3e3m
From Proteopedia
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| - | + | ==Crystal structure of a LacI family transcriptional regulator from Silicibacter pomeroyi== | |
| - | + | <StructureSection load='3e3m' size='340' side='right' caption='[[3e3m]], [[Resolution|resolution]] 1.60Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3e3m]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Ruegeria_pomeroyi Ruegeria pomeroyi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E3M OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3E3M FirstGlance]. <br> | |
| - | + | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SPOA0242 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=89184 Ruegeria pomeroyi])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3e3m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e3m OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3e3m RCSB], [http://www.ebi.ac.uk/pdbsum/3e3m PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3e3m TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | == | + | == Evolutionary Conservation == |
| - | [[3e3m]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Ruegeria_pomeroyi Ruegeria pomeroyi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E3M OCA]. | + | [[Image:Consurf_key_small.gif|200px|right]] |
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e3/3e3m_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Ruegeria pomeroyi]] | [[Category: Ruegeria pomeroyi]] | ||
| - | [[Category: Almo, S C | + | [[Category: Almo, S C]] |
| - | [[Category: Bain, K T | + | [[Category: Bain, K T]] |
| - | [[Category: Bonanno, J B | + | [[Category: Bonanno, J B]] |
| - | [[Category: Burley, S K | + | [[Category: Burley, S K]] |
| - | [[Category: Freeman, J | + | [[Category: Freeman, J]] |
| - | [[Category: Iizuka, M | + | [[Category: Iizuka, M]] |
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[[Category: Structural genomic]] | [[Category: Structural genomic]] | ||
| + | [[Category: Ozyurt, S]] | ||
| + | [[Category: Sauder, J M]] | ||
| + | [[Category: Smith, D]] | ||
| + | [[Category: Wasserman, S]] | ||
| + | [[Category: Dna-binding]] | ||
| + | [[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
[[Category: Transcription]] | [[Category: Transcription]] | ||
[[Category: Transcription regulation]] | [[Category: Transcription regulation]] | ||
Revision as of 13:17, 6 November 2014
Crystal structure of a LacI family transcriptional regulator from Silicibacter pomeroyi
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Categories: Ruegeria pomeroyi | Almo, S C | Bain, K T | Bonanno, J B | Burley, S K | Freeman, J | Iizuka, M | Structural genomic | Ozyurt, S | Sauder, J M | Smith, D | Wasserman, S | Dna-binding | NYSGXRC, New York SGX Research Center for Structural Genomics | PSI, Protein structure initiative | Transcription | Transcription regulation
