3exm
From Proteopedia
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| - | + | ==Crystal structure of the phosphatase SC4828 with the non-hydrolyzable nucleotide GPCP== | |
| - | + | <StructureSection load='3exm' size='340' side='right' caption='[[3exm]], [[Resolution|resolution]] 1.65Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3exm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_coelicolor_a3(2) Streptomyces coelicolor a3(2)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EXM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3EXM FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GP2:PHOSPHOMETHYLPHOSPHONIC+ACID+GUANOSYL+ESTER'>GP2</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | |
| - | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3cbt|3cbt]]</td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SCO5041, SCK7.14, SCK7.14c ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=100226 Streptomyces coelicolor A3(2)])</td></tr> | |
| - | == | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nucleoside-diphosphatase Nucleoside-diphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.6 3.6.1.6] </span></td></tr> |
| - | [[3exm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_coelicolor_a3(2) Streptomyces coelicolor a3(2)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EXM OCA]. | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3exm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3exm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3exm RCSB], [http://www.ebi.ac.uk/pdbsum/3exm PDBsum]</span></td></tr> |
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ex/3exm_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Nucleoside-diphosphatase]] | [[Category: Nucleoside-diphosphatase]] | ||
| - | [[Category: Edwards, A M | + | [[Category: Edwards, A M]] |
| - | [[Category: Joachimiak, A | + | [[Category: Joachimiak, A]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | [[Category: Savchenko, A | + | [[Category: Savchenko, A]] |
| - | [[Category: Singer, A U | + | [[Category: Singer, A U]] |
| - | [[Category: Xu, X | + | [[Category: Xu, X]] |
| - | [[Category: Yakunin, A F | + | [[Category: Yakunin, A F]] |
| - | [[Category: Zheng, H | + | [[Category: Zheng, H]] |
[[Category: Gdp/udp'ase]] | [[Category: Gdp/udp'ase]] | ||
[[Category: Hydrolase]] | [[Category: Hydrolase]] | ||
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[[Category: Mcsg]] | [[Category: Mcsg]] | ||
[[Category: Metalloprotein]] | [[Category: Metalloprotein]] | ||
| - | [[Category: Midwest center for structural genomic]] | ||
[[Category: Non-hydrolysable gdp analogue]] | [[Category: Non-hydrolysable gdp analogue]] | ||
[[Category: Nucleoside diphosphatase]] | [[Category: Nucleoside diphosphatase]] | ||
| - | [[Category: Protein structure initiative | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
[[Category: Streptomyce]] | [[Category: Streptomyce]] | ||
| - | [[Category: Structural genomic]] | ||
Revision as of 08:34, 26 November 2014
Crystal structure of the phosphatase SC4828 with the non-hydrolyzable nucleotide GPCP
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Categories: Nucleoside-diphosphatase | Edwards, A M | Joachimiak, A | Structural genomic | Savchenko, A | Singer, A U | Xu, X | Yakunin, A F | Zheng, H | Gdp/udp'ase | Hydrolase | Lipocalcin fold | Mcsg | Metalloprotein | Non-hydrolysable gdp analogue | Nucleoside diphosphatase | PSI, Protein structure initiative | Streptomyce
