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3es5

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[[Image:3es5.png|left|200px]]
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==Crystal Structure of Partitivirus (PsV-F)==
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<StructureSection load='3es5' size='340' side='right' caption='[[3es5]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3es5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Penicillium_stoloniferum_virus_f Penicillium stoloniferum virus f]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ES5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ES5 FirstGlance]. <br>
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</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ej6|1ej6]], [[2btv|2btv]], [[1uf2|1uf2]], [[1m1c|1m1c]], [[1k4r|1k4r]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3es5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3es5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3es5 RCSB], [http://www.ebi.ac.uk/pdbsum/3es5 PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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For most dsRNA viruses, the genome-enclosing capsid comprises 120 copies of a single capsid protein (CP) organized into 60 icosahedrally equivalent dimers, generally identified as 2 nonsymmetrically interacting CP molecules with extensive lateral contacts. The crystal structure of a partitivirus, Penicillium stoloniferum virus F (PsV-F), reveals a different organization, in which the CP dimer is related by almost-perfect local 2-fold symmetry, forms prominent surface arches, and includes extensive structure swapping between the 2 subunits. An electron cryomicroscopy map of PsV-F shows that the disordered N terminus of each CP molecule interacts with the dsRNA genome and probably participates in its packaging or transcription. Intact PsV-F particles mediate semiconservative transcription, and transcripts are likely to exit through negatively charged channels at the icosahedral 5-fold axes. Other findings suggest that the PsV-F capsid is assembled from dimers of CP dimers, with an arrangement similar to flavivirus E glycoproteins.
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{{STRUCTURE_3es5| PDB=3es5 | SCENE= }}
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Atomic structure reveals the unique capsid organization of a dsRNA virus.,Pan J, Dong L, Lin L, Ochoa WF, Sinkovits RS, Havens WM, Nibert ML, Baker TS, Ghabrial SA, Tao YJ Proc Natl Acad Sci U S A. 2009 Feb 25. PMID:19246376<ref>PMID:19246376</ref>
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===Crystal Structure of Partitivirus (PsV-F)===
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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{{ABSTRACT_PUBMED_19246376}}
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== References ==
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<references/>
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==About this Structure==
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__TOC__
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[[3es5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Penicillium_stoloniferum_virus_f Penicillium stoloniferum virus f]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ES5 OCA].
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</StructureSection>
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==Reference==
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<ref group="xtra">PMID:019246376</ref><references group="xtra"/>
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[[Category: Penicillium stoloniferum virus f]]
[[Category: Penicillium stoloniferum virus f]]
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[[Category: Baker, T S.]]
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[[Category: Baker, T S]]
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[[Category: Dong, L.]]
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[[Category: Dong, L]]
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[[Category: Ghabrial, S A.]]
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[[Category: Ghabrial, S A]]
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[[Category: Havens, W M.]]
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[[Category: Havens, W M]]
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[[Category: Lin, L.]]
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[[Category: Lin, L]]
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[[Category: Nibert, M L.]]
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[[Category: Nibert, M L]]
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[[Category: Ochoa, W F.]]
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[[Category: Ochoa, W F]]
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[[Category: Pan, J.]]
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[[Category: Pan, J]]
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[[Category: Sinkovits, R S.]]
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[[Category: Sinkovits, R S]]
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[[Category: Tao, Y J.]]
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[[Category: Tao, Y J]]
[[Category: T=2 capsid]]
[[Category: T=2 capsid]]
[[Category: Double stranded rna virus]]
[[Category: Double stranded rna virus]]

Revision as of 08:45, 26 November 2014

Crystal Structure of Partitivirus (PsV-F)

3es5, resolution 3.30Å

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