3fke

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[[Image:3fke.png|left|200px]]
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==Structure of the Ebola VP35 Interferon Inhibitory Domain==
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<StructureSection load='3fke' size='340' side='right' caption='[[3fke]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3fke]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Viruses Viruses]. The October 2014 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Ebola Virus Proteins'' by David Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2014_10 10.2210/rcsb_pdb/mom_2014_10]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FKE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3FKE FirstGlance]. <br>
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</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VP35 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10239 Viruses])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fke FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fke OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3fke RCSB], [http://www.ebi.ac.uk/pdbsum/3fke PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Ebola viruses (EBOVs) cause rare but highly fatal outbreaks of viral hemorrhagic fever in humans, and approved treatments for these infections are currently lacking. The Ebola VP35 protein is multifunctional, acting as a component of the viral RNA polymerase complex, a viral assembly factor, and an inhibitor of host interferon (IFN) production. Mutation of select basic residues within the C-terminal half of VP35 abrogates its dsRNA-binding activity, impairs VP35-mediated IFN antagonism, and attenuates EBOV growth in vitro and in vivo. Because VP35 contributes to viral escape from host innate immunity and is required for EBOV virulence, understanding the structural basis for VP35 dsRNA binding, which correlates with suppression of IFN activity, is of high importance. Here, we report the structure of the C-terminal VP35 IFN inhibitory domain (IID) solved to a resolution of 1.4 A and show that VP35 IID forms a unique fold. In the structure, we identify 2 basic residue clusters, one of which is important for dsRNA binding. The dsRNA binding cluster is centered on Arg-312, a highly conserved residue required for IFN inhibition. Mutation of residues within this cluster significantly changes the surface electrostatic potential and diminishes dsRNA binding activity. The high-resolution structure and the identification of the conserved dsRNA binding residue cluster provide opportunities for antiviral therapeutic design. Our results suggest a structure-based model for dsRNA-mediated innate immune antagonism by Ebola VP35 and other similarly constructed viral antagonists.
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{{STRUCTURE_3fke| PDB=3fke | SCENE= }}
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Structure of the Ebola VP35 interferon inhibitory domain.,Leung DW, Ginder ND, Fulton DB, Nix J, Basler CF, Honzatko RB, Amarasinghe GK Proc Natl Acad Sci U S A. 2009 Jan 2. PMID:19122151<ref>PMID:19122151</ref>
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===Structure of the Ebola VP35 Interferon Inhibitory Domain===
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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{{ABSTRACT_PUBMED_19122151}}
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== References ==
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<references/>
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==About this Structure==
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__TOC__
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[[3fke]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Viruses Viruses]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FKE OCA].
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</StructureSection>
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[[Category: Ebola Virus Proteins]]
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==Reference==
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[[Category: RCSB PDB Molecule of the Month]]
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<ref group="xtra">PMID:019122151</ref><references group="xtra"/>
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[[Category: Viruses]]
[[Category: Viruses]]
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[[Category: Amarasinghe, G K.]]
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[[Category: Amarasinghe, G K]]
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[[Category: Basler, C F.]]
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[[Category: Basler, C F]]
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[[Category: Fulton, D B.]]
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[[Category: Fulton, D B]]
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[[Category: Ginder, N D.]]
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[[Category: Ginder, N D]]
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[[Category: Honzatko, R B.]]
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[[Category: Honzatko, R B]]
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[[Category: Leung, D W.]]
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[[Category: Leung, D W]]
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[[Category: Nix, J.]]
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[[Category: Nix, J]]
[[Category: Interferon antiviral system evasion]]
[[Category: Interferon antiviral system evasion]]
[[Category: Rna binding domain]]
[[Category: Rna binding domain]]

Revision as of 10:08, 3 December 2014

Structure of the Ebola VP35 Interferon Inhibitory Domain

3fke, resolution 1.40Å

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